RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 SH2B1Q9NRF2 756 aaPredicted RBP23.16■■□□□ 1.3
ACTB-210ENST00000477812 ZBED4O75132 1171 aa23.15■■□□□ 1.3
ACTB-210ENST00000477812 IFNAR1P17181 557 aa23.15■■□□□ 1.3
ACTB-210ENST00000477812 QRICH1Q2TAL8 776 aa23.15■■□□□ 1.3
ACTB-210ENST00000477812 Q3C1V9 767 aa23.15■■□□□ 1.3
ACTB-210ENST00000477812 SPATC1LQ9H0A9 340 aa23.15■■□□□ 1.3
ACTB-210ENST00000477812 PPP1R11O60927 126 aaPredicted RBP23.14■■□□□ 1.29
ACTB-210ENST00000477812 CTDNEP1O95476 244 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 ICAM1P05362 532 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 GPRC5AQ8NFJ5 357 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 SNX21Q969T3 373 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 TMX3Q96JJ7 454 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 PIGSQ96S52 555 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 BEGAINQ9BUH8 593 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 TEX13BQ9BXU2 312 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 RAVER2Q9HCJ3 691 aaKnown RBP23.14■■□□□ 1.29
ACTB-210ENST00000477812 VAT1LQ9HCJ6 419 aa23.14■■□□□ 1.29
ACTB-210ENST00000477812 ZBTB5O15062 677 aa23.13■■□□□ 1.29
ACTB-210ENST00000477812 DHX16O60231 1041 aaKnown RBP23.13■■□□□ 1.29
ACTB-210ENST00000477812 CCDC174Q6PII3 467 aa23.13■■□□□ 1.29
ACTB-210ENST00000477812 MOV10L1Q9BXT6 1211 aaKnown RBP23.13■■□□□ 1.29
ACTB-210ENST00000477812 TSKSQ9UJT2 592 aa23.13■■□□□ 1.29
ACTB-210ENST00000477812 GPR25O00155 361 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 TAL1P17542 331 aaPredicted RBP23.12■■□□□ 1.29
ACTB-210ENST00000477812 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 RIOX2Q8IUF8 465 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 CPXCR1Q8N123 301 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 RRP36Q96EU6 259 aaKnown RBP23.12■■□□□ 1.29
ACTB-210ENST00000477812 AGBL1Q96MI9 1066 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 PORCNQ9H237 461 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 RIPK3Q9Y572 518 aa23.12■■□□□ 1.29
ACTB-210ENST00000477812 PNMA6FA0A0J9YX94 578 aa23.11■■□□□ 1.29
ACTB-210ENST00000477812 STAT3P40763 770 aa23.11■■□□□ 1.29
ACTB-210ENST00000477812 SNRNP48Q6IEG0 339 aaKnown RBP23.11■■□□□ 1.29
ACTB-210ENST00000477812 PHKBQ93100 1093 aa23.11■■□□□ 1.29
ACTB-210ENST00000477812 RNF26Q9BY78 433 aaPredicted RBP23.11■■□□□ 1.29
ACTB-210ENST00000477812 SMCHD1A6NHR9 2005 aa23.11■■□□□ 1.29
ACTB-210ENST00000477812 hCG_1642624A0A1W2PR95 340 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 CPLX1O14810 134 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 HSPA1AP0DMV8 641 aaKnown RBP23.1■■□□□ 1.29
ACTB-210ENST00000477812 HSPA1BP0DMV9 641 aaKnown RBP23.1■■□□□ 1.29
ACTB-210ENST00000477812 CAP1Q01518 475 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 NSUN7Q8NE18 718 aaKnown RBP23.1■■□□□ 1.29
ACTB-210ENST00000477812 SHCBP1Q8NEM2 672 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 PIBF1Q8WXW3 757 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 CCPG1Q9ULG6 757 aa23.1■■□□□ 1.29
ACTB-210ENST00000477812 V9GY48 417 aaPredicted RBP23.1■■□□□ 1.29
ACTB-210ENST00000477812 FOXN1O15353 648 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 PRPF3O43395 683 aaKnown RBP23.09■■□□□ 1.29
ACTB-210ENST00000477812 PPFIA3O75145 1194 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 FMNL1O95466 1100 aaPredicted RBP23.09■■□□□ 1.29
ACTB-210ENST00000477812 CTGFP29279 349 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 LACTBP83111 547 aaPredicted RBP23.09■■□□□ 1.29
ACTB-210ENST00000477812 PLS1Q14651 629 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 PKN1Q16512 942 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 PNMA2Q9UL42 364 aa23.09■■□□□ 1.29
ACTB-210ENST00000477812 CTDP1Q9Y5B0 961 aaPredicted RBP23.09■■□□□ 1.29
ACTB-210ENST00000477812 STK36Q9NRP7 1315 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 ZSWIM8A7E2V4 1837 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 MYH6P13533 1939 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 DTNBO60941 627 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 CDKL5O76039 1030 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 HSPA8P11142 646 aaKnown RBP23.08■■□□□ 1.29
ACTB-210ENST00000477812 ERCC3P19447 782 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 CCNA1P78396 465 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 SP3Q02447 781 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 CPLX2Q6PUV4 134 aaKnown RBP23.08■■□□□ 1.29
ACTB-210ENST00000477812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.08■■□□□ 1.296e-19■■□□□ 12.8
ACTB-210ENST00000477812 FBXO11Q86XK2 927 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 SLC26A6Q9BXS9 759 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 EFCC1Q9HA90 598 aa23.08■■□□□ 1.29
ACTB-210ENST00000477812 SEC63Q9UGP8 760 aaKnown RBP23.08■■□□□ 1.29
ACTB-210ENST00000477812 K7ELQ4 463 aaPredicted RBP23.07■■□□□ 1.28
ACTB-210ENST00000477812 JAK2O60674 1132 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 SLC25A27O95847 323 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 COPB2P35606 906 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 CUL4AQ13619 759 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 PFKFB3Q16875 520 aaPredicted RBP23.07■■□□□ 1.28
ACTB-210ENST00000477812 TKFCQ3LXA3 575 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 SMARCC2Q8TAQ2 1214 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 ZNF296Q8WUU4 475 aaPredicted RBP23.07■■□□□ 1.28
ACTB-210ENST00000477812 CLEC4DQ8WXI8 215 aa23.07■■□□□ 1.28
ACTB-210ENST00000477812 LLPHQ9BRT6 129 aaKnown RBP23.07■■□□□ 1.28
ACTB-210ENST00000477812 RBM27Q9P2N5 1060 aaKnown RBP23.07■■□□□ 1.28
ACTB-210ENST00000477812 PTPDC1A2A3K4 754 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 OPLAHO14841 1288 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 FDPSP14324 419 aaKnown RBP23.06■■□□□ 1.28
ACTB-210ENST00000477812 USH1GQ495M9 461 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 MUM1L1Q5H9M0 696 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 ARHGAP39Q9C0H5 1083 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 MROH8Q9H579 483 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 RNF146Q9NTX7 359 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 ABCB11O95342 1321 aa23.06■■□□□ 1.28
ACTB-210ENST00000477812 FKTNO75072 461 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 ALAS1P13196 640 aa23.05■■□□□ 1.28
ACTB-210ENST00000477812 SCG2P13521 617 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms