RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 SMARCA5O60264 1052 aaPredicted RBP22.17■■□□□ 1.14
PRKCD-204ENST00000477794 TSPY3P0CV98 308 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 TSPY8P0CW00 308 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 EPHB4P54760 987 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 IKQ13123 557 aaPredicted RBP22.17■■□□□ 1.14
PRKCD-204ENST00000477794 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 MFSD5Q6N075 450 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 CHURC1Q8WUH1 139 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 OSBP2Q969R2 916 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 CEP95Q96GE4 821 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 MTIF3Q9H2K0 278 aaKnown RBP22.17■■□□□ 1.14
PRKCD-204ENST00000477794 TBX21Q9UL17 535 aa22.17■■□□□ 1.14
PRKCD-204ENST00000477794 IGKV6D-41A0A0C4DH26 115 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 ASGR1P07306 291 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 BMP3P12645 472 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 STAT2P52630 851 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 GJA9P57773 515 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 CCSAPQ6IQ19 270 aaPredicted RBP22.16■■□□□ 1.14
PRKCD-204ENST00000477794 CCDC129Q6ZRS4 1044 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
PRKCD-204ENST00000477794 ARMCX2Q7L311 632 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 FAM160B2Q86V87 743 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 UPF3AQ9H1J1 476 aaKnown RBP22.16■■□□□ 1.14
PRKCD-204ENST00000477794 ACAD9Q9H845 621 aa22.16■■□□□ 1.14
PRKCD-204ENST00000477794 ASB14A6NK59 587 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 PATL2C9JE40 543 aaKnown RBP22.15■■□□□ 1.14
PRKCD-204ENST00000477794 ARVCFO00192 962 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 ERC2O15083 957 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 CABYRO75952 493 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 TKFCQ3LXA3 575 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 SLFN13Q68D06 897 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 PSRC1Q6PGN9 363 aaPredicted RBP22.15■■□□□ 1.14
PRKCD-204ENST00000477794 TIFAQ96CG3 184 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 SEZ6LQ9BYH1 1024 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 PRUNE2Q8WUY3 3088 aa22.15■■□□□ 1.14
PRKCD-204ENST00000477794 GREB1LQ9C091 1923 aaPredicted RBP22.14■■□□□ 1.14
PRKCD-204ENST00000477794 PRDM1O75626 825 aa22.14■■□□□ 1.13
PRKCD-204ENST00000477794 LRRC47Q8N1G4 583 aaKnown RBP22.14■■□□□ 1.13
PRKCD-204ENST00000477794 NEDD1Q8NHV4 660 aa22.14■■□□□ 1.13
PRKCD-204ENST00000477794 ZNF576Q9H609 170 aa22.14■■□□□ 1.13
PRKCD-204ENST00000477794 HOMER2Q9NSB8 354 aa22.14■■□□□ 1.13
PRKCD-204ENST00000477794 EYSQ5T1H1 3165 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 PLIN4Q96Q06 1357 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 VCANP13611 3396 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 ZEB2O60315 1214 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 SLC1A4P43007 532 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 CDK7P50613 346 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 CCDC144CPQ8IYA2 1237 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 IFNL3Q8IZI9 196 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 GAS2L1Q99501 681 aaPredicted RBP22.13■■□□□ 1.13
PRKCD-204ENST00000477794 NAPBQ9H115 298 aa22.13■■□□□ 1.13
PRKCD-204ENST00000477794 MYADML2A6NDP7 307 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 TMEM232C9JQI7 657 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 TNFAIP2Q03169 654 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 GMCL1Q96IK5 515 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.12■■□□□ 1.13
PRKCD-204ENST00000477794 AP5M1Q9H0R1 490 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
PRKCD-204ENST00000477794 EPB41L4AQ9HCS5 686 aaPredicted RBP22.12■■□□□ 1.13
PRKCD-204ENST00000477794 GRIN2CQ14957 1233 aa22.11■■□□□ 1.13
PRKCD-204ENST00000477794 STAG1Q8WVM7 1258 aa22.11■■□□□ 1.13
PRKCD-204ENST00000477794 RNF146Q9NTX7 359 aa22.11■■□□□ 1.13
PRKCD-204ENST00000477794 TTC41PQ6P2S7 1318 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 NKX3-2P78367 333 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 TFAP4Q01664 338 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 RAB30Q15771 203 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 FSD1Q9BTV5 496 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 CDH23Q9H251 3354 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 MSRAQ9UJ68 235 aa22.1■■□□□ 1.13
PRKCD-204ENST00000477794 M0R2C6 588 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 PLA2G6O60733 806 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 CSF2RAP15509 400 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 PPARAQ07869 468 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 TJAP1Q5JTD0 557 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 TMEM240Q5SV17 173 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 FAM126BQ8IXS8 530 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 FAM133AQ8N9E0 248 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 PPP1R12CQ9BZL4 782 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 STX8Q9UNK0 236 aa22.09■■□□□ 1.13
PRKCD-204ENST00000477794 CNTN2Q02246 1040 aa22.08■■□□□ 1.13
PRKCD-204ENST00000477794 FSCN1Q16658 493 aaKnown RBP22.08■■□□□ 1.13
PRKCD-204ENST00000477794 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
PRKCD-204ENST00000477794 TLK2Q86UE8 772 aa22.08■■□□□ 1.13
PRKCD-204ENST00000477794 FGD4Q96M96 766 aa22.08■■□□□ 1.13
PRKCD-204ENST00000477794 IL23AQ9NPF7 189 aa22.08■■□□□ 1.13
PRKCD-204ENST00000477794 A1CFQ9NQ94 594 aaKnown RBP22.08■■□□□ 1.13
PRKCD-204ENST00000477794 ZBTB47Q9UFB7 747 aaPredicted RBP22.08■■□□□ 1.13
PRKCD-204ENST00000477794 TSPY2A6NKD2 308 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 ALAS1P13196 640 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 MCCP23508 829 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 ZNF365Q70YC5 407 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 TRERF1Q96PN7 1200 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 HIPK3Q9H422 1215 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 MYH4Q9Y623 1939 aa22.07■■□□□ 1.12
PRKCD-204ENST00000477794 ADCY6O43306 1168 aa22.06■■□□□ 1.12
PRKCD-204ENST00000477794 FGBP02675 491 aa22.06■■□□□ 1.12
PRKCD-204ENST00000477794 RASIP1Q5U651 963 aa22.06■■□□□ 1.12
PRKCD-204ENST00000477794 IQSEC1Q6DN90 963 aa22.06■■□□□ 1.12
PRKCD-204ENST00000477794 RCSD1Q6JBY9 416 aa22.06■■□□□ 1.12
PRKCD-204ENST00000477794 CXCL17Q6UXB2 119 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms