RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 VWA5AO00534 786 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 CPLX1O14810 134 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 GCLCP48506 637 aaPredicted RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 SCRN1Q12765 414 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 PPP2R5BQ15173 497 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 CDC37Q16543 378 aaPredicted RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
SEC13-215ENST00000477547 ZSCAN31Q96LW9 406 aaPredicted RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 FAM217BQ9NTX9 383 aaPredicted RBP17.78■□□□□ 0.44
SEC13-215ENST00000477547 ZNF236Q9UL36 1845 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 CYTH3O43739 400 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 TLR2O60603 784 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 ADD1P35611 737 aaKnown RBP17.77■□□□□ 0.44
SEC13-215ENST00000477547 SNAP25P60880 206 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 HOMER1Q86YM7 354 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
SEC13-215ENST00000477547 ANKRD13CQ8N6S4 541 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.44
SEC13-215ENST00000477547 SLC38A10Q9HBR0 1119 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 CPA4Q9UI42 421 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 COLQQ9Y215 455 aaPredicted RBP17.77■□□□□ 0.44
SEC13-215ENST00000477547 PLXNA1Q9UIW2 1896 aa17.77■□□□□ 0.44
SEC13-215ENST00000477547 PEX10O60683 326 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 ZBED4O75132 1171 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 FDX1P10109 184 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 CCDC174Q6PII3 467 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
SEC13-215ENST00000477547 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 CCDC82Q8N4S0 544 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 VAT1LQ9HCJ6 419 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 TXNRD2Q9NNW7 524 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 ADAMTS5Q9UNA0 930 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 RABGAP1Q9Y3P9 1069 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 ZNFX1Q9P2E3 1918 aaKnown RBP17.76■□□□□ 0.43
SEC13-215ENST00000477547 LCTP09848 1927 aa17.76■□□□□ 0.43
SEC13-215ENST00000477547 CNMDO75829 334 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 SMARCA1P28370 1054 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 PLS1Q14651 629 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 CD99L2Q8TCZ2 262 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 RRP36Q96EU6 259 aaKnown RBP17.75■□□□□ 0.43
SEC13-215ENST00000477547 TMX3Q96JJ7 454 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 PIGSQ96S52 555 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 BTBD7Q9P203 1132 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 MORF4L1Q9UBU8 362 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 SEC63Q9UGP8 760 aaKnown RBP17.75■□□□□ 0.43
SEC13-215ENST00000477547 ZNF214Q9UL59 606 aaPredicted RBP17.75■□□□□ 0.43
SEC13-215ENST00000477547 PTPN22Q9Y2R2 807 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 DOCK3Q8IZD9 2030 aa17.75■□□□□ 0.43
SEC13-215ENST00000477547 CDKL5O76039 1030 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 BCRP11274 1271 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 IFNAR1P17181 557 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 OAZ1P54368 228 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 ERVK-9P63128 1117 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 ERVK-24P63145 666 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 FUT2Q10981 343 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 TMEM132BQ14DG7 1078 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 PHKBQ93100 1093 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 TEX13BQ9BXU2 312 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
SEC13-215ENST00000477547 RBPJLQ9UBG7 517 aa17.74■□□□□ 0.43
SEC13-215ENST00000477547 hCG_1642624A0A1W2PR95 340 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 K7ELQ4 463 aaPredicted RBP17.73■□□□□ 0.43
SEC13-215ENST00000477547 ZBTB5O15062 677 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 PPFIA3O75145 1194 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 ICAM1P05362 532 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 TAL1P17542 331 aaPredicted RBP17.73■□□□□ 0.43
SEC13-215ENST00000477547 CAP1Q01518 475 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 NTRK3Q16288 839 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
SEC13-215ENST00000477547 C17orf99Q6UX52 265 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 SNX21Q969T3 373 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 SLC26A6Q9BXS9 759 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 CCPG1Q9ULG6 757 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 ZNF536O15090 1300 aa17.73■□□□□ 0.43
SEC13-215ENST00000477547 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
SEC13-215ENST00000477547 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
SEC13-215ENST00000477547 USH1GQ495M9 461 aa17.72■□□□□ 0.43
SEC13-215ENST00000477547 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
SEC13-215ENST00000477547 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
SEC13-215ENST00000477547 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms