RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 EFCC1Q9HA90 598 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 C1orf112Q9NSG2 853 aa20.4■□□□□ 0.86
VARS2-209ENST00000477288 NEURL1BA8MQ27 555 aa20.39■□□□□ 0.86
VARS2-209ENST00000477288 ADCY8P40145 1251 aa20.39■□□□□ 0.86
VARS2-209ENST00000477288 BCAMP50895 628 aa20.39■□□□□ 0.86
VARS2-209ENST00000477288 POLGP54098 1239 aaPredicted RBP20.39■□□□□ 0.86
VARS2-209ENST00000477288 POMGNT1Q8WZA1 660 aa20.39■□□□□ 0.86
VARS2-209ENST00000477288 PARP2Q9UGN5 583 aa20.39■□□□□ 0.86
VARS2-209ENST00000477288 DDX41Q9UJV9 622 aaKnown RBP20.39■□□□□ 0.86
VARS2-209ENST00000477288 POLA2Q14181 598 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 NUCKS1Q9H1E3 243 aaKnown RBP20.39■□□□□ 0.85
VARS2-209ENST00000477288 CSPG5O95196 566 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 HADHQ16836 314 aaKnown RBP20.39■□□□□ 0.85
VARS2-209ENST00000477288 CHMP6Q96FZ7 201 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 TRIM56Q9BRZ2 755 aaKnown RBP20.39■□□□□ 0.85
VARS2-209ENST00000477288 PANK4Q9NVE7 773 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 HESX1Q9UBX0 185 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 PCDHA12Q9UN75 941 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 KRT3P12035 628 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 NME8Q8N427 588 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 ERVV-2B6SEH9 535 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 SLFN12Q8IYM2 578 aa20.39■□□□□ 0.85
VARS2-209ENST00000477288 EDC3Q96F86 508 aaKnown RBP20.39■□□□□ 0.85
VARS2-209ENST00000477288 DDX25Q9UHL0 483 aaKnown RBP20.39■□□□□ 0.85
VARS2-209ENST00000477288 LRRIQ4A6NIV6 560 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 RNF40O75150 1001 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 ADKP55263 362 aaKnown RBP20.38■□□□□ 0.85
VARS2-209ENST00000477288 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 MGEA5O60502 916 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 TMEM191BP0C7N4 346 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 TMOD1P28289 359 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 JADE1Q6IE81 842 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 DCLK2Q8N568 766 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 RIC8AQ9NPQ8 531 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 CCPG1Q9ULG6 757 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 PLA2G4DQ86XP0 818 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 IMPACTQ9P2X3 320 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 BAIAP2L1Q9UHR4 511 aa20.38■□□□□ 0.85
VARS2-209ENST00000477288 GPKOWQ92917 476 aaPredicted RBP eCLIP20.38■□□□□ 0.853e-6■■■■□ 22.9
VARS2-209ENST00000477288 CTNNA1P35221 906 aaKnown RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 PHBP35232 272 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 ADAT2Q7Z6V5 191 aaKnown RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 DPP9Q86TI2 863 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 ZNF277Q9NRM2 450 aaPredicted RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 PTPRTO14522 1441 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 KCNK3O14649 394 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 OAS2P29728 719 aaKnown RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 DMP1Q13316 513 aaPredicted RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 RPS6KC1Q96S38 1066 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 TMEM232C9JQI7 657 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 ARHGAP25P42331 645 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 IFNL3Q8IZI9 196 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 FAM71BQ8TC56 605 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 ARHGAP6O43182 974 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 SMIM24O75264 130 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 BAG2O95816 211 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 PDE6CP51160 858 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 HVCN1Q96D96 273 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 BCAP29Q9UHQ4 241 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 PLEKHG3A1L390 1219 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 BUB1O43683 1085 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 FAM160B1Q5W0V3 765 aa20.37■□□□□ 0.85
VARS2-209ENST00000477288 BZW2Q9Y6E2 419 aaKnown RBP20.37■□□□□ 0.85
VARS2-209ENST00000477288 VCX3AQ9NNX9 186 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 NRBP2Q9NSY0 501 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 NEO1Q92859 1461 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 IL1RL1Q01638 556 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 TMTC4Q5T4D3 741 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 PNMA1Q8ND90 353 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 ATP5JP18859 108 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 KAZNQ674X7 775 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 ARMCX5Q6P1M9 558 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 PDZD4Q76G19 769 aaPredicted RBP20.36■□□□□ 0.85
VARS2-209ENST00000477288 FAM178BQ8IXR5 827 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 TMEM2Q9UHN6 1383 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 A6NNZ2 444 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 KLRF2D3W0D1 207 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 KRIT1O00522 736 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 GADD45BO75293 160 aaPredicted RBP20.36■□□□□ 0.85
VARS2-209ENST00000477288 PPFIA1Q13136 1202 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 TUBB8Q3ZCM7 444 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 CCDC68Q9H2F9 335 aa20.36■□□□□ 0.85
VARS2-209ENST00000477288 CASP2P42575 452 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.35■□□□□ 0.85
VARS2-209ENST00000477288 WHAMMQ8TF30 809 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 KCNJ18B7U540 433 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 KCNJ12Q14500 433 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 MUM1Q2TAK8 710 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 MCTP2Q6DN12 878 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 CCDC127Q96BQ5 260 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 H0YCG3 227 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 UHMK1Q8TAS1 419 aaKnown RBP20.35■□□□□ 0.85
VARS2-209ENST00000477288 HDAC11Q96DB2 347 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 PIK3CAP42336 1068 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 ABCB5Q2M3G0 1257 aa20.35■□□□□ 0.85
VARS2-209ENST00000477288 DPH5Q9H2P9 285 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms