RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 SMTNL1A8MU46 457 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CD44P16070 742 aaKnown RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 TXKP42681 527 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 SH3BP5LQ7L8J4 393 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 TTLL1O95922 423 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 EEF2P13639 858 aaKnown RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 GABPAQ06546 454 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 TPD52L1Q16890 204 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 LRRC8AQ8IWT6 810 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CAMKK2Q96RR4 588 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 DPEP1P16444 411 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 UBA7P41226 1012 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 STAT6P42226 847 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 USH1GQ495M9 461 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 ADGRF4Q8IZF3 695 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 CPLX3Q8WVH0 158 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 ANKS1AQ92625 1134 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 FERMT2Q96AC1 680 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 MYH8P13535 1937 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
HDAC7-221ENST00000477203 SLFN14P0C7P3 912 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 MED15Q96RN5 788 aa15.16■□□□□ 0.02
HDAC7-221ENST00000477203 JAG1P78504 1218 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 REXO1Q8N1G1 1221 aaKnown RBP15.15■□□□□ 0.02
HDAC7-221ENST00000477203 MTRQ99707 1265 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 SHTN1A0MZ66 631 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 SARM1Q6SZW1 724 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
HDAC7-221ENST00000477203 CTNND2Q9UQB3 1225 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 PES1O00541 588 aaKnown RBP15.15■□□□□ 0.02
HDAC7-221ENST00000477203 TDP2O95551 362 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 ERCC3P19447 782 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 SLC1A4P43007 532 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 RRAGBQ5VZM2 374 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 CSRNP1Q96S65 589 aa15.15■□□□□ 0.02
HDAC7-221ENST00000477203 SMCHD1A6NHR9 2005 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 PPP1R11O60927 126 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-221ENST00000477203 GH2P01242 217 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 NONOQ15233 471 aaKnown RBP eCLIP15.14■□□□□ 0.01
HDAC7-221ENST00000477203 IQUBQ8NA54 791 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 HPS3Q969F9 1004 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 JMJD4Q9H9V9 463 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 MARCH6O60337 910 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 DPYDQ12882 1025 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 ZDHHC15Q96MV8 337 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 TMX1Q9H3N1 280 aa15.14■□□□□ 0.01
HDAC7-221ENST00000477203 CCT6AP40227 531 aaKnown RBP15.13■□□□□ 0.01
HDAC7-221ENST00000477203 ARMCX5Q6P1M9 558 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-221ENST00000477203 SPZ1Q9BXG8 430 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 PSMD14O00487 310 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 MORC3Q14149 939 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 NAA30Q147X3 362 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-221ENST00000477203 STYK1Q6J9G0 422 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 C4orf32Q8N8J7 132 aa15.13■□□□□ 0.01
HDAC7-221ENST00000477203 NEMFO60524 1076 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 TXLNAP40222 546 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 ICA1Q05084 483 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
HDAC7-221ENST00000477203 FAM177A1Q8N128 213 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-221ENST00000477203 TTLL6Q8N841 843 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 LRRC15Q8TF66 581 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 POTEMA6NI47 508 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 GNA11P29992 359 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 ADKP55263 362 aaKnown RBP15.12■□□□□ 0.01
HDAC7-221ENST00000477203 TAF3Q5VWG9 929 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-221ENST00000477203 ZMYND12Q9H0C1 365 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 PI4KBQ9UBF8 816 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 SLC37A4O43826 429 aa15.12■□□□□ 0.01
HDAC7-221ENST00000477203 BMP15O95972 392 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms