RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PI16Q6UXB8 463 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 METTL16Q86W50 562 aaKnown RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 NOD1Q9Y239 953 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 HMMRO75330 724 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 BCAR3O75815 825 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 GRM5P41594 1212 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 HERVK_113P62684 666 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 PAWRQ96IZ0 340 aaKnown RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 DBNDD2Q9BQY9 259 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 EHD4Q9H223 541 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 C11orf49Q9H6J7 331 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 TMPRSS4Q9NRS4 437 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 SERPINB13Q9UIV8 391 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 ZBTB21Q9ULJ3 1066 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 PCDHGA11Q9Y5H2 935 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 IVNS1ABPQ9Y6Y0 642 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 MSCO60682 206 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 CYP2E1P05181 493 aaPredicted RBP8.78□□□□□ -1
BRCA1-214ENST00000477152 CYP2B6P20813 491 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 ZAP70P43403 619 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 MFSD14CQ5VZR4 134 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 PLEKHH3Q7Z736 793 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
BRCA1-214ENST00000477152 ZNF384Q8TF68 577 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 P2RX7Q99572 595 aaKnown RBP8.78□□□□□ -1
BRCA1-214ENST00000477152 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 PALD1Q9ULE6 856 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 RABGAP1Q9Y3P9 1069 aa8.78□□□□□ -1
BRCA1-214ENST00000477152 SFI1A8K8P3 1242 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1
BRCA1-214ENST00000477152 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1
BRCA1-214ENST00000477152 FSHRP23945 695 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 BMP8BP34820 402 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 RPIAP49247 311 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 ERVK-9P63128 1117 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 ERVK-24P63145 666 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 CERKLQ49MI3 558 aaPredicted RBP8.77□□□□□ -1
BRCA1-214ENST00000477152 MAGEB6Q8N7X4 407 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 CRNKL1Q9BZJ0 848 aaKnown RBP8.77□□□□□ -1
BRCA1-214ENST00000477152 SH2D4AQ9H788 454 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 GJD2Q9UKL4 321 aa8.77□□□□□ -1
BRCA1-214ENST00000477152 GDF11O95390 407 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 HNRNPUQ00839 825 aaKnown RBP eCLIP8.77□□□□□ -1.01
BRCA1-214ENST00000477152 PDE4CQ08493 712 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 ABCB5Q2M3G0 1257 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 CLASRPQ8N2M8 674 aaKnown RBP8.77□□□□□ -1.01
BRCA1-214ENST00000477152 TPCN2Q8NHX9 752 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 C12orf42Q96LP6 360 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 APBA2Q99767 749 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 PAGR1Q9BTK6 254 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-214ENST00000477152 SAP30BPQ9UHR5 308 aaKnown RBP8.77□□□□□ -1.01
BRCA1-214ENST00000477152 OGDHLQ9ULD0 1010 aa8.77□□□□□ -1.01
BRCA1-214ENST00000477152 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-214ENST00000477152 GH2P01242 217 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 WDR78Q5VTH9 848 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 TATDN1Q6P1N9 297 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 GPR142Q7Z601 462 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 AACSQ86V21 672 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 C7orf61Q8IZ16 206 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 EDC3Q96F86 508 aaKnown RBP8.76□□□□□ -1.01
BRCA1-214ENST00000477152 KIAA1683Q9H0B3 1180 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 CCDC8Q9H0W5 538 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-214ENST00000477152 HOXC10Q9NYD6 342 aa8.76□□□□□ -1.01
BRCA1-214ENST00000477152 MYO5AQ9Y4I1 1855 aaKnown RBP8.76□□□□□ -1.01
BRCA1-214ENST00000477152 SLC15A5A6NIM6 579 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 IFIT2P09913 472 aaKnown RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 ATP2B2Q01814 1243 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 PRKAG2Q9UGJ0 569 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 SWAP70Q9UH65 585 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 DBNLQ9UJU6 430 aaKnown RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 DDX60LQ5H9U9 1706 aaKnown RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 SIPA1L1O43166 1804 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 MYH8P13535 1937 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 SIAH2O43255 324 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 STRNO43815 780 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 RAB11FIP3O75154 756 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 SLC19A1P41440 591 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 DYNLL1P63167 89 aaKnown RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 MAP3K21Q5TCX8 1036 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 CATSPERGQ6ZRH7 1159 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 TRIM50Q86XT4 487 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 RPAP2Q8IXW5 612 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-214ENST00000477152 MIGA1Q8NAN2 632 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 TRIB2Q92519 343 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 KIF1BPQ96EK5 621 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 ARHGEF10LQ9HCE6 1279 aa8.75□□□□□ -1.01
BRCA1-214ENST00000477152 CYLDQ9NQC7 956 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms