RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 NCOA5Q9HCD5 579 aaKnown RBP20.54■□□□□ 0.88
SREBF1-211ENST00000476994 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 GOLGA8AA7E2F4 631 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
SREBF1-211ENST00000476994 HERVK_113P62684 666 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 CCT2P78371 535 aaKnown RBP20.53■□□□□ 0.88
SREBF1-211ENST00000476994 FUT2Q10981 343 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 STK3Q13188 491 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 CUL4AQ13619 759 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 NTRK3Q16288 839 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 RTN1Q16799 776 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 UBE2Q1Q7Z7E8 422 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 CCDC144CPQ8IYA2 1237 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 SPICE1Q8N0Z3 855 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 LPAR1Q92633 364 aa20.53■□□□□ 0.88
SREBF1-211ENST00000476994 NUP88Q99567 741 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-211ENST00000476994 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.53■□□□□ 0.881e-9■■■■□ 21.1
SREBF1-211ENST00000476994 HMX1Q9NP08 348 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-211ENST00000476994 PAK6Q9NQU5 681 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-211ENST00000476994 EVI5O60447 810 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 VCAM1P19320 739 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 MAPK4P31152 587 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 ADD1P35611 737 aaKnown RBP20.52■□□□□ 0.88
SREBF1-211ENST00000476994 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 CHRDL2Q6WN34 429 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 SYNE3Q6ZMZ3 975 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 SOCS4Q8WXH5 440 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
SREBF1-211ENST00000476994 NUDT12Q9BQG2 462 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 SLKQ9H2G2 1235 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-211ENST00000476994 MTMR7Q9Y216 660 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 PLXNB2O15031 1838 aa20.52■□□□□ 0.88
SREBF1-211ENST00000476994 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
SREBF1-211ENST00000476994 WDR46O15213 610 aaKnown RBP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 PARP1P09874 1014 aaKnown RBP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 PPP2R5BQ15173 497 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 TMTC3Q6ZXV5 915 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 NECAB2Q7Z6G3 386 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 CHMP4CQ96CF2 233 aa20.51■□□□□ 0.87
SREBF1-211ENST00000476994 NAP1L2Q9ULW6 460 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-211ENST00000476994 GOLGA8HP0CJ92 632 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 BMP3P12645 472 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 SLC1A4P43007 532 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CCNA1P78396 465 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 GPATCH4Q5T3I0 446 aaKnown RBP20.5■□□□□ 0.87
SREBF1-211ENST00000476994 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 BTNL9Q6UXG8 535 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 KCTD1Q719H9 257 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CCDC83Q8IWF9 413 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 ANKLE1Q8NAG6 615 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CTCFLQ8NI51 663 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-211ENST00000476994 PAGR1Q9BTK6 254 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CRISPLD2Q9H0B8 497 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
SREBF1-211ENST00000476994 GJD2Q9UKL4 321 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CNTNAP5Q8WYK1 1306 aa20.5■□□□□ 0.87
SREBF1-211ENST00000476994 CYTH3O43739 400 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 PLA2G6O60733 806 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 CYP2B6P20813 491 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 KIF5BP33176 963 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 ERVK-9P63128 1117 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 ERVK-24P63145 666 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 SRBD1Q8N5C6 995 aaKnown RBP20.49■□□□□ 0.87
SREBF1-211ENST00000476994 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L15C9J2P7 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L13C9JLJ4 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L11C9JVI0 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 KLRF2D3W0D1 207 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L18D6R9N7 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L22D6RA61 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L17D6RBQ6 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L19D6RCP7 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L20D6RJB6 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 ANP32AP39687 249 aaKnown RBP20.48■□□□□ 0.87
SREBF1-211ENST00000476994 USP17L24Q0WX57 530 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 NSUN7Q8NE18 718 aaKnown RBP20.48■□□□□ 0.87
SREBF1-211ENST00000476994 PAWRQ96IZ0 340 aaKnown RBP20.48■□□□□ 0.87
SREBF1-211ENST00000476994 RPAP3Q9H6T3 665 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-211ENST00000476994 GPCPD1Q9NPB8 672 aa20.48■□□□□ 0.87
SREBF1-211ENST00000476994 XRCC5P13010 732 aaKnown RBP20.47■□□□□ 0.87
SREBF1-211ENST00000476994 IFNAR1P17181 557 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 RGS2P41220 211 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 CMTR1Q8N1G2 835 aaKnown RBP20.47■□□□□ 0.87
SREBF1-211ENST00000476994 SMARCC2Q8TAQ2 1214 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 SPZ1Q9BXG8 430 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 RIOX1Q9H6W3 641 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 FBXO28Q9NVF7 368 aa20.47■□□□□ 0.87
SREBF1-211ENST00000476994 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
SREBF1-211ENST00000476994 TMEM232C9JQI7 657 aa20.46■□□□□ 0.87
SREBF1-211ENST00000476994 RAD21O60216 631 aa20.46■□□□□ 0.87
SREBF1-211ENST00000476994 DTNBO60941 627 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms