RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DISC1Q9NRI5 854 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 FAM53CQ9NYF3 392 aa18.05■□□□□ 0.48
VARS2-207ENST00000476162 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
VARS2-207ENST00000476162 COBLO75128 1261 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 AKR1B1P15121 316 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 GNA11P29992 359 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 ALDH1B1P30837 517 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
VARS2-207ENST00000476162 RRAGBQ5VZM2 374 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 LRRC47Q8N1G4 583 aaKnown RBP18.04■□□□□ 0.48
VARS2-207ENST00000476162 CTNND2Q9UQB3 1225 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 KIF2AO00139 706 aaPredicted RBP18.04■□□□□ 0.48
VARS2-207ENST00000476162 MMP10P09238 476 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
VARS2-207ENST00000476162 NAALADL2Q58DX5 795 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 CDKAL1Q5VV42 579 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 CLEC10AQ8IUN9 316 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 TMEM139Q8IV31 216 aa18.04■□□□□ 0.48
VARS2-207ENST00000476162 LAD1O00515 517 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 TEX33O43247 280 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 RPN1P04843 607 aaKnown RBP18.03■□□□□ 0.48
VARS2-207ENST00000476162 UBA7P41226 1012 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 ADKP55263 362 aaKnown RBP18.03■□□□□ 0.48
VARS2-207ENST00000476162 NONOQ15233 471 aaKnown RBP eCLIP18.03■□□□□ 0.48
VARS2-207ENST00000476162 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 TC2NQ8N9U0 490 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 RASSF8Q8NHQ8 419 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 TSPYL1Q9H0U9 437 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 PLIN4Q96Q06 1357 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 G3V3G9 751 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 CCNT1O60563 726 aaKnown RBP18.03■□□□□ 0.48
VARS2-207ENST00000476162 PDE6BP35913 854 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 PLIN2Q99541 437 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 SERPINB13Q9UIV8 391 aa18.03■□□□□ 0.48
VARS2-207ENST00000476162 APBA3O96018 575 aa18.02■□□□□ 0.48
VARS2-207ENST00000476162 CHRM1P11229 460 aaPredicted RBP18.02■□□□□ 0.48
VARS2-207ENST00000476162 PRPHP41219 470 aa18.02■□□□□ 0.48
VARS2-207ENST00000476162 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.48
VARS2-207ENST00000476162 CDC42EP5Q6NZY7 148 aa18.02■□□□□ 0.48
VARS2-207ENST00000476162 BAG1Q99933 345 aaPredicted RBP18.02■□□□□ 0.48
VARS2-207ENST00000476162 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
VARS2-207ENST00000476162 ADD3Q9UEY8 706 aaKnown RBP18.02■□□□□ 0.48
VARS2-207ENST00000476162 FOCADQ5VW36 1801 aa18.02■□□□□ 0.48
VARS2-207ENST00000476162 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.47
VARS2-207ENST00000476162 PLSCR1O15162 318 aa18.02■□□□□ 0.47
VARS2-207ENST00000476162 NAA30Q147X3 362 aaPredicted RBP18.02■□□□□ 0.47
VARS2-207ENST00000476162 MASTLQ96GX5 879 aa18.02■□□□□ 0.47
VARS2-207ENST00000476162 CCSER1Q9C0I3 900 aa18.02■□□□□ 0.47
VARS2-207ENST00000476162 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.47
VARS2-207ENST00000476162 BIN2Q9UBW5 565 aaPredicted RBP18.02■□□□□ 0.47
VARS2-207ENST00000476162 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.47
VARS2-207ENST00000476162 ARHGAP6O43182 974 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 JAKMIP3Q5VZ66 844 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
VARS2-207ENST00000476162 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 NEK8Q86SG6 692 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 TEX2Q8IWB9 1127 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 RWDD2AQ9UIY3 292 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 MAPK8IP1Q9UQF2 711 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 GDAQ9Y2T3 454 aa18.01■□□□□ 0.47
VARS2-207ENST00000476162 CCP110O43303 1012 aa18■□□□□ 0.47
VARS2-207ENST00000476162 OR52Z1P0C646 297 aa18■□□□□ 0.47
VARS2-207ENST00000476162 PAK1Q13153 545 aa18■□□□□ 0.47
VARS2-207ENST00000476162 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
VARS2-207ENST00000476162 MSL1Q68DK7 614 aa18■□□□□ 0.47
VARS2-207ENST00000476162 HHIPL2Q6UWX4 724 aa18■□□□□ 0.47
VARS2-207ENST00000476162 CREBRFQ8IUR6 639 aa18■□□□□ 0.47
VARS2-207ENST00000476162 TBCKQ8TEA7 893 aa18■□□□□ 0.47
VARS2-207ENST00000476162 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
VARS2-207ENST00000476162 TEKT1Q969V4 418 aa18■□□□□ 0.47
VARS2-207ENST00000476162 CTAGE1Q96RT6 745 aa18■□□□□ 0.47
VARS2-207ENST00000476162 DBNDD1Q9H9R9 158 aa18■□□□□ 0.47
VARS2-207ENST00000476162 GPCPD1Q9NPB8 672 aa18■□□□□ 0.47
VARS2-207ENST00000476162 TMEM260Q9NX78 707 aa18■□□□□ 0.47
VARS2-207ENST00000476162 SWAP70Q9UH65 585 aa18■□□□□ 0.47
VARS2-207ENST00000476162 TTLL1O95922 423 aa18■□□□□ 0.47
VARS2-207ENST00000476162 SNHG28P0DPA3 235 aa18■□□□□ 0.47
VARS2-207ENST00000476162 SHMT1P34896 483 aa18■□□□□ 0.47
VARS2-207ENST00000476162 REXO1Q8N1G1 1221 aaKnown RBP18■□□□□ 0.47
VARS2-207ENST00000476162 LRRC15Q8TF66 581 aa18■□□□□ 0.47
VARS2-207ENST00000476162 COA7Q96BR5 231 aa18■□□□□ 0.47
VARS2-207ENST00000476162 ESYT2A0FGR8 921 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 ERICH4A6NGS2 130 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 STX10O60499 249 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 PRCPP42785 496 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 NFIAQ12857 509 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 FCHSD1Q86WN1 690 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 REXO1L1PQ8IX06 675 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 NELFBQ8WX92 580 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 ZFP91Q96JP5 570 aaPredicted RBP17.99■□□□□ 0.47
VARS2-207ENST00000476162 KBTBD4Q9NVX7 518 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
VARS2-207ENST00000476162 PBX1P40424 430 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms