RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 APOBEC3FQ8IUX4 373 aaKnown RBP23.36■■□□□ 1.33
ITGA4-207ENST00000476089 NUP88Q99567 741 aaPredicted RBP23.36■■□□□ 1.33
ITGA4-207ENST00000476089 CSRNP2Q9H175 543 aa23.36■■□□□ 1.33
ITGA4-207ENST00000476089 CDC37Q16543 378 aaPredicted RBP23.35■■□□□ 1.33
ITGA4-207ENST00000476089 UVSSAQ2YD98 709 aa23.35■■□□□ 1.33
ITGA4-207ENST00000476089 SPECC1Q5M775 1068 aa23.35■■□□□ 1.33
ITGA4-207ENST00000476089 ACER1Q8TDN7 264 aa23.35■■□□□ 1.33
ITGA4-207ENST00000476089 HOOK2Q96ED9 719 aa23.35■■□□□ 1.33
ITGA4-207ENST00000476089 MRVI1Q9Y6F6 885 aa23.35■■□□□ 1.33
ITGA4-207ENST00000476089 ASTN2O75129 1339 aaPredicted RBP23.35■■□□□ 1.33
ITGA4-207ENST00000476089 MRPL12P52815 198 aaKnown RBP23.34■■□□□ 1.33
ITGA4-207ENST00000476089 GRIN1Q05586 938 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 ZRSR1Q15695 479 aaKnown RBP23.34■■□□□ 1.33
ITGA4-207ENST00000476089 QRICH1Q2TAL8 776 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 SYDE2Q5VT97 1194 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 SPICE1Q8N0Z3 855 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 CUL5Q93034 780 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 GLT8D2Q9H1C3 349 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 RIC8AQ9NPQ8 531 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 GINM1Q9NU53 330 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 BIN2Q9UBW5 565 aaPredicted RBP23.34■■□□□ 1.33
ITGA4-207ENST00000476089 SBF1O95248 1867 aa23.34■■□□□ 1.33
ITGA4-207ENST00000476089 PPP1R11O60927 126 aaPredicted RBP23.33■■□□□ 1.33
ITGA4-207ENST00000476089 ARL6IP4Q66PJ3 421 aaKnown RBP23.33■■□□□ 1.33
ITGA4-207ENST00000476089 PHF20L1A8MW92 1017 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 CAVIN2O95810 425 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 ANGEL2Q5VTE6 544 aaKnown RBP23.33■■□□□ 1.32
ITGA4-207ENST00000476089 JAKMIP3Q5VZ66 844 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 DCAF15Q66K64 600 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 BTNL9Q6UXG8 535 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 VCPKMTQ9H867 229 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.32
ITGA4-207ENST00000476089 PCDHA1Q9Y5I3 950 aa23.33■■□□□ 1.32
ITGA4-207ENST00000476089 VWA3AA6NCI4 1184 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 STAT2P52630 851 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 NEK8Q86SG6 692 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 CNNM3Q8NE01 707 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 PSTPIP2Q9H939 334 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 RNF181Q9P0P0 153 aa23.32■■□□□ 1.32
ITGA4-207ENST00000476089 STX1AQ16623 288 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 ANO6Q4KMQ2 910 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 FAM200AQ8TCP9 573 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 AMNQ9BXJ7 453 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 KIAA1468Q9P260 1216 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.31■■□□□ 1.32
ITGA4-207ENST00000476089 LAD1O00515 517 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 CTNND1O60716 968 aaKnown RBP23.31■■□□□ 1.32
ITGA4-207ENST00000476089 CCDC173Q0VFZ6 552 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 LETM2Q2VYF4 491 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 TRPM4Q8TD43 1214 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 TBCKQ8TEA7 893 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 CHURC1Q8WUH1 139 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 CCDC34Q96HJ3 373 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 FEZ1Q99689 392 aa23.31■■□□□ 1.32
ITGA4-207ENST00000476089 LMOD1P29536 600 aaPredicted RBP23.3■■□□□ 1.32
ITGA4-207ENST00000476089 EPS15P42566 896 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 TRAF1Q13077 416 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 NBPF12Q5TAG4 269 aaPredicted RBP23.3■■□□□ 1.32
ITGA4-207ENST00000476089 KRBA2Q6ZNG9 492 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 FBXO11Q86XK2 927 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 TMEM260Q9NX78 707 aa23.3■■□□□ 1.32
ITGA4-207ENST00000476089 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.3■■□□□ 1.32
ITGA4-207ENST00000476089 POLR2DO15514 142 aaKnown RBP23.29■■□□□ 1.32
ITGA4-207ENST00000476089 CCNT1O60563 726 aaKnown RBP23.29■■□□□ 1.32
ITGA4-207ENST00000476089 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
ITGA4-207ENST00000476089 ZYXQ15942 572 aaKnown RBP23.29■■□□□ 1.32
ITGA4-207ENST00000476089 LONRF3Q496Y0 759 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 FAM83BQ5T0W9 1011 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 ZNF341Q9BYN7 854 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 ATAD5Q96QE3 1844 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 KANK3Q6NY19 840 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 DTHD1Q6ZMT9 781 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 ELOA2Q8IYF1 753 aaPredicted RBP23.29■■□□□ 1.32
ITGA4-207ENST00000476089 C4orf32Q8N8J7 132 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 PRR12Q9ULL5 1215 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 PPP2R3BQ9Y5P8 575 aa23.29■■□□□ 1.32
ITGA4-207ENST00000476089 LONP1P36776 959 aaKnown RBP23.28■■□□□ 1.32
ITGA4-207ENST00000476089 SYMPKQ92797 1274 aaKnown RBP23.28■■□□□ 1.32
ITGA4-207ENST00000476089 DDNO94850 711 aaPredicted RBP23.27■■□□□ 1.32
ITGA4-207ENST00000476089 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
ITGA4-207ENST00000476089 KIAA1755Q5JYT7 1200 aa23.27■■□□□ 1.32
ITGA4-207ENST00000476089 FAM160B2Q86V87 743 aa23.27■■□□□ 1.32
ITGA4-207ENST00000476089 ERCC4Q92889 916 aaPredicted RBP23.27■■□□□ 1.32
ITGA4-207ENST00000476089 EPSTI1Q96J88 318 aa23.27■■□□□ 1.32
ITGA4-207ENST00000476089 PYM1Q9BRP8 204 aaKnown RBP23.27■■□□□ 1.32
ITGA4-207ENST00000476089 DNAJC25Q9H1X3 360 aa23.27■■□□□ 1.32
ITGA4-207ENST00000476089 NEMFO60524 1076 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 TXLNAP40222 546 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 PRPHP41219 470 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 ZNF165P49910 485 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 UBE2SQ16763 222 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 USP49Q70CQ1 688 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 PDILTQ8N807 584 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 PLA2G6O60733 806 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
ITGA4-207ENST00000476089 SNAP25P60880 206 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 MCTP2Q6DN12 878 aa23.26■■□□□ 1.31
ITGA4-207ENST00000476089 GLIS2Q9BZE0 524 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms