RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 CCSAPQ6IQ19 270 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-208ENST00000476061 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 DEFB123Q8N688 67 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 FERMT2Q96AC1 680 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 FGD4Q96M96 766 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-208ENST00000476061 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 ELP1O95163 1332 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 KIAA0355O15063 1070 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 FGAP02671 866 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 CLTBP09497 229 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 MCCP23508 829 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 ACLYP53396 1101 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 TLE2Q04725 743 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 ANKRD33Q7Z3H0 272 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 KATNBL1Q9H079 304 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-208ENST00000476061 PRR12Q9ULL5 1215 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 STXBP5LQ9Y2K9 1186 aa11.72□□□□□ -0.53
PTPN7-208ENST00000476061 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 A0A0D9SFI3 127 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 TRIM43BA6NCK2 446 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 ASB14A6NK59 587 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 GJA9P57773 515 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 CCDC144BQ3MJ40 725 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 BTNL9Q6UXG8 535 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 ARMCX2Q7L311 632 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 BADQ92934 168 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 TRIM43Q96BQ3 446 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 FAM227BQ96M60 508 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 TTC14Q96N46 770 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 A1CFQ9NQ94 594 aaKnown RBP11.71□□□□□ -0.53
PTPN7-208ENST00000476061 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 STARD7Q9NQZ5 370 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 RNF146Q9NTX7 359 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 PNMA2Q9UL42 364 aa11.71□□□□□ -0.53
PTPN7-208ENST00000476061 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
PTPN7-208ENST00000476061 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 LOC102724159A0A0B4J2E5 919 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 NMT2O60551 498 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 ICAM1P05362 532 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
PTPN7-208ENST00000476061 PWP2Q15269 919 aaKnown RBP11.7□□□□□ -0.54
PTPN7-208ENST00000476061 SHHQ15465 462 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 KCNA10Q16322 511 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 LENG1Q96BZ8 264 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-208ENST00000476061 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 RANBP17Q9H2T7 1088 aaKnown RBP11.7□□□□□ -0.54
PTPN7-208ENST00000476061 HOMER2Q9NSB8 354 aa11.7□□□□□ -0.54
PTPN7-208ENST00000476061 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 DCDC2CA8MYV0 355 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 ADCY6O43306 1168 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 ASGR1P07306 291 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 C6orf222P0C671 652 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-208ENST00000476061 ALAS1P13196 640 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 RAG1P15918 1043 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 CDK7P50613 346 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 CNTN2Q02246 1040 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 FAAP100Q0VG06 881 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-208ENST00000476061 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 Q7L0L9 218 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 SEZ6LQ9BYH1 1024 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 RNF41Q9H4P4 317 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-208ENST00000476061 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
PTPN7-208ENST00000476061 Q9Y3F1 56 aa11.69□□□□□ -0.54
PTPN7-208ENST00000476061 MYADML2A6NDP7 307 aa11.68□□□□□ -0.54
PTPN7-208ENST00000476061 CTAGE5O15320 804 aa11.68□□□□□ -0.54
PTPN7-208ENST00000476061 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
PTPN7-208ENST00000476061 SDSP20132 328 aa11.68□□□□□ -0.54
PTPN7-208ENST00000476061 ITGB8P26012 769 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms