RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 TRIM43BA6NCK2 446 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 ADAMTS4O75173 837 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 BMP3P12645 472 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 LRRC47Q8N1G4 583 aaKnown RBP15.35■□□□□ 0.05
VSTM4-203ENST00000476018 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 PI4K2BQ8TCG2 481 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 TRIM43Q96BQ3 446 aaPredicted RBP15.35■□□□□ 0.05
VSTM4-203ENST00000476018 SPC25Q9HBM1 224 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 RAVER2Q9HCJ3 691 aaKnown RBP15.35■□□□□ 0.05
VSTM4-203ENST00000476018 STARD7Q9NQZ5 370 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 RIPK3Q9Y572 518 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
VSTM4-203ENST00000476018 PQBP1O60828 265 aaKnown RBP15.34■□□□□ 0.05
VSTM4-203ENST00000476018 DUSP11O75319 330 aaKnown RBP15.34■□□□□ 0.05
VSTM4-203ENST00000476018 MX1P20591 662 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 STAT2P52630 851 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 PPARAQ07869 468 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 SHHQ15465 462 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 ZMYM1Q5SVZ6 1142 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 SLFN13Q68D06 897 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 TOX2Q96NM4 488 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 ISY1Q9ULR0 285 aaKnown RBP15.34■□□□□ 0.05
VSTM4-203ENST00000476018 CUL9Q8IWT3 2517 aa15.34■□□□□ 0.05
VSTM4-203ENST00000476018 KIAA0355O15063 1070 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 SNAI1O95863 264 aaPredicted RBP15.33■□□□□ 0.04
VSTM4-203ENST00000476018 RAG1P15918 1043 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 ACLYP53396 1101 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 SMAD3P84022 425 aaKnown RBP15.33■□□□□ 0.04
VSTM4-203ENST00000476018 TFAP4Q01664 338 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 ANKRD33Q7Z3H0 272 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 SH3RF1Q7Z6J0 888 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 PCSK9Q8NBP7 692 aaKnown RBP15.33■□□□□ 0.04
VSTM4-203ENST00000476018 CHURC1Q8WUH1 139 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 LENG1Q96BZ8 264 aaPredicted RBP15.33■□□□□ 0.04
VSTM4-203ENST00000476018 GMCL1Q96IK5 515 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 ACAD9Q9H845 621 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 TMEM39AQ9NV64 488 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.33■□□□□ 0.04
VSTM4-203ENST00000476018 MROH7Q68CQ1 1323 aa15.33■□□□□ 0.04
VSTM4-203ENST00000476018 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 TMEM232C9JQI7 657 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 CST5P28325 142 aaPredicted RBP15.32■□□□□ 0.04
VSTM4-203ENST00000476018 SLC1A4P43007 532 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
VSTM4-203ENST00000476018 TKFCQ3LXA3 575 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 KLHDC9Q8NEP7 349 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 GUCD1Q96NT3 240 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 SEC62Q99442 399 aaKnown RBP15.32■□□□□ 0.04
VSTM4-203ENST00000476018 STX8Q9UNK0 236 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 ELP1O95163 1332 aa15.32■□□□□ 0.04
VSTM4-203ENST00000476018 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 PLA2G6O60733 806 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 FPGSQ05932 587 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 KCNA10Q16322 511 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 ARMCX2Q7L311 632 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 RNPC3Q96LT9 517 aaKnown RBP15.31■□□□□ 0.04
VSTM4-203ENST00000476018 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 PCDHB15Q9Y5E8 787 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 CDH23Q9H251 3354 aa15.31■□□□□ 0.04
VSTM4-203ENST00000476018 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
VSTM4-203ENST00000476018 CCDC144BQ3MJ40 725 aa15.3■□□□□ 0.04
VSTM4-203ENST00000476018 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
VSTM4-203ENST00000476018 OTUD7AQ8TE49 926 aaPredicted RBP15.3■□□□□ 0.04
VSTM4-203ENST00000476018 TMEM265A0A087WTH1 108 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 A0A0U1RQG5 324 aaPredicted RBP15.29■□□□□ 0.04
VSTM4-203ENST00000476018 ASB14A6NK59 587 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 GJA9P57773 515 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 FAAP100Q0VG06 881 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 EVI5LQ96CN4 794 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 FGD4Q96M96 766 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
VSTM4-203ENST00000476018 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
VSTM4-203ENST00000476018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.29■□□□□ 0.04
VSTM4-203ENST00000476018 TIMP1P01033 207 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 ASGR1P07306 291 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 MCCP23508 829 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 ITGB8P26012 769 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 GNASQ5JWF2 1037 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 RCSD1Q6JBY9 416 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 VTI1AQ96AJ9 217 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 TRERF1Q96PN7 1200 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
VSTM4-203ENST00000476018 SEMA6BQ9H3T3 888 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 A1CFQ9NQ94 594 aaKnown RBP15.28■□□□□ 0.04
VSTM4-203ENST00000476018 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
VSTM4-203ENST00000476018 ANAPC4Q9UJX5 808 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms