RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 EPHB4P54760 987 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 CCSAPQ6IQ19 270 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-205ENST00000475944 ARMCX2Q7L311 632 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 NAPBQ9H115 298 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 TTYH1Q9H313 450 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-205ENST00000475944 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
CDRT1-205ENST00000475944 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 TIMP1P01033 207 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 ASGR1P07306 291 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 FOSL2P15408 326 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 GJA9P57773 515 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-205ENST00000475944 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 FGD4Q96M96 766 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
CDRT1-205ENST00000475944 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 TBX21Q9UL17 535 aa12.88□□□□□ -0.35
CDRT1-205ENST00000475944 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-205ENST00000475944 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-205ENST00000475944 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-205ENST00000475944 TMEM232C9JQI7 657 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 SLC1A4P43007 532 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 TFAP4Q01664 338 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 PPARAQ07869 468 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 PPIGQ13427 754 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDRT1-205ENST00000475944 GNASQ5JWF2 1037 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 LAMA2P24043 3122 aaKnown RBP12.87□□□□□ -0.35
CDRT1-205ENST00000475944 A0A0C4DFX4 3053 aa12.87□□□□□ -0.35
CDRT1-205ENST00000475944 ARVCFO00192 962 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 TLR3O15455 904 aaKnown RBP12.86□□□□□ -0.35
CDRT1-205ENST00000475944 ADCY6O43306 1168 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 DNAJB2P25686 324 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 CDK7P50613 346 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-205ENST00000475944 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 PI4K2BQ8TCG2 481 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 SEC62Q99442 399 aaKnown RBP12.86□□□□□ -0.35
CDRT1-205ENST00000475944 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
CDRT1-205ENST00000475944 UNC80Q8N2C7 3258 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 ASB14A6NK59 587 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 PLA2G6O60733 806 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 NKX3-2P78367 333 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
CDRT1-205ENST00000475944 TMEM199Q8N511 208 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDRT1-205ENST00000475944 KATNBL1Q9H079 304 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
CDRT1-205ENST00000475944 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
CDRT1-205ENST00000475944 MCM3APO60318 1980 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 ALAS1P13196 640 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 MCCP23508 829 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 PSRC1Q6PGN9 363 aaPredicted RBP12.84□□□□□ -0.35
CDRT1-205ENST00000475944 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 ZNF536O15090 1300 aa12.84□□□□□ -0.35
CDRT1-205ENST00000475944 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-205ENST00000475944 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 CTAGE5O15320 804 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 ZEB2O60315 1214 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 CABYRO75952 493 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 CSF2RAP15509 400 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 MX1P20591 662 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 BEX3Q00994 111 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 TMEM240Q5SV17 173 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 RCSD1Q6JBY9 416 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 TIFAQ96CG3 184 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 PPP1R12CQ9BZL4 782 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
CDRT1-205ENST00000475944 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-205ENST00000475944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDRT1-205ENST00000475944 CD4P01730 458 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 GRIN2CQ14957 1233 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 CXCL17Q6UXB2 119 aa12.82□□□□□ -0.36
CDRT1-205ENST00000475944 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-205ENST00000475944 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms