RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 GJA9P57773 515 aa24.44■■□□□ 1.5
VPS36-203ENST00000475375 NOL8Q76FK4 1167 aaKnown RBP24.44■■□□□ 1.5
VPS36-203ENST00000475375 C16orf59Q7L2K0 433 aa24.44■■□□□ 1.5
VPS36-203ENST00000475375 LRRCC1Q9C099 1032 aa24.44■■□□□ 1.5
VPS36-203ENST00000475375 UPF3AQ9H1J1 476 aaKnown RBP24.44■■□□□ 1.5
VPS36-203ENST00000475375 PRDM12Q9H4Q4 367 aa24.44■■□□□ 1.5
VPS36-203ENST00000475375 FEM1BQ9UK73 627 aa24.44■■□□□ 1.5
VPS36-203ENST00000475375 MUC3AQ02505 3323 aa24.43■■□□□ 1.5
VPS36-203ENST00000475375 GSG1L2A8MUP6 293 aa24.43■■□□□ 1.5
VPS36-203ENST00000475375 PSRC1Q6PGN9 363 aaPredicted RBP24.43■■□□□ 1.5
VPS36-203ENST00000475375 ZNF365Q70YC5 407 aa24.43■■□□□ 1.5
VPS36-203ENST00000475375 ZNF444Q8N0Y2 327 aaPredicted RBP24.43■■□□□ 1.5
VPS36-203ENST00000475375 CHST13Q8NET6 341 aa24.43■■□□□ 1.5
VPS36-203ENST00000475375 SLC38A10Q9HBR0 1119 aa24.43■■□□□ 1.5
VPS36-203ENST00000475375 GREB1LQ9C091 1923 aaPredicted RBP24.42■■□□□ 1.5
VPS36-203ENST00000475375 TNFRSF10AO00220 468 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 SMARCA5O60264 1052 aaPredicted RBP24.42■■□□□ 1.5
VPS36-203ENST00000475375 PRDM1O75626 825 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 TDO2P48775 406 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 GIMAP6Q6P9H5 292 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 CCDC144CPQ8IYA2 1237 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 LRRC47Q8N1G4 583 aaKnown RBP24.42■■□□□ 1.5
VPS36-203ENST00000475375 FGD4Q96M96 766 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 CHMP4BQ9H444 224 aaKnown RBP24.42■■□□□ 1.5
VPS36-203ENST00000475375 ZNF287Q9HBT7 754 aa24.42■■□□□ 1.5
VPS36-203ENST00000475375 APPP05067 770 aa24.41■■□□□ 1.5
VPS36-203ENST00000475375 CYP2C18P33260 490 aa24.41■■□□□ 1.5
VPS36-203ENST00000475375 BEX3Q00994 111 aa24.41■■□□□ 1.5
VPS36-203ENST00000475375 FAM126BQ8IXS8 530 aa24.41■■□□□ 1.5
VPS36-203ENST00000475375 MSRAQ9UJ68 235 aa24.41■■□□□ 1.5
VPS36-203ENST00000475375 RASIP1Q5U651 963 aa24.4■■□□□ 1.5
VPS36-203ENST00000475375 CEP95Q96GE4 821 aa24.4■■□□□ 1.5
VPS36-203ENST00000475375 IGKV6D-41A0A0C4DH26 115 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 TTLL1O95922 423 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 IGFBP4P22692 258 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 OAZ1P54368 228 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 CNTN2Q02246 1040 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 TNFAIP2Q03169 654 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 IKQ13123 557 aaPredicted RBP24.39■■□□□ 1.49
VPS36-203ENST00000475375 RAB30Q15771 203 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.39■■□□□ 1.49
VPS36-203ENST00000475375 APPBP2Q92624 585 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 OSBP2Q969R2 916 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 MTIF3Q9H2K0 278 aaKnown RBP24.39■■□□□ 1.49
VPS36-203ENST00000475375 IL23AQ9NPF7 189 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 MTMR4Q9NYA4 1195 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 MCM3APO60318 1980 aa24.39■■□□□ 1.49
VPS36-203ENST00000475375 CCDC85BQ15834 202 aaPredicted RBP24.38■■□□□ 1.49
VPS36-203ENST00000475375 AKNAD1Q5T1N1 836 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 CXCL17Q6UXB2 119 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 KBTBD3Q8NAB2 608 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 ATXN2LQ8WWM7 1075 aaKnown RBP24.38■■□□□ 1.49
VPS36-203ENST00000475375 MKL1Q969V6 931 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 ACAD9Q9H845 621 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 THEGQ9P2T0 379 aa24.38■■□□□ 1.49
VPS36-203ENST00000475375 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.37■■□□□ 1.49
VPS36-203ENST00000475375 TMEM232C9JQI7 657 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 GPAA1O43292 621 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 FGBP02675 491 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 BMP3P12645 472 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 GMCL1P1Q8NEA9 526 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 CHMP4CQ96CF2 233 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 HIPK3Q9H422 1215 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 EPB41L4AQ9HCS5 686 aaPredicted RBP24.37■■□□□ 1.49
VPS36-203ENST00000475375 MYH4Q9Y623 1939 aa24.37■■□□□ 1.49
VPS36-203ENST00000475375 CHD9Q3L8U1 2897 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 CTAGE5O15320 804 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 RNF113AO15541 343 aaKnown RBP24.36■■□□□ 1.49
VPS36-203ENST00000475375 TSPY3P0CV98 308 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 TSPY8P0CW00 308 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 GNAT2P19087 354 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 TLK2Q86UE8 772 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 IL27Q8NEV9 243 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 HERVK_113Q902F9 699 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 GPATCH3Q96I76 525 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 KATNBL1Q9H079 304 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 AP5M1Q9H0R1 490 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 NKX2-4Q9H2Z4 354 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 SLC28A3Q9HAS3 691 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 RNF146Q9NTX7 359 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 CXXC1Q9P0U4 656 aaPredicted RBP24.36■■□□□ 1.49
VPS36-203ENST00000475375 SYNPO2Q9UMS6 1093 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 MYO9BQ13459 2157 aa24.36■■□□□ 1.49
VPS36-203ENST00000475375 ASB14A6NK59 587 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 CABYRO75952 493 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 CD4P01730 458 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 FDX1P10109 184 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 COL9A1P20849 921 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 STAT2P52630 851 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 OTOP2Q7RTS6 562 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 ASB2Q96Q27 587 aa24.35■■□□□ 1.49
VPS36-203ENST00000475375 A1CFQ9NQ94 594 aaKnown RBP24.35■■□□□ 1.49
VPS36-203ENST00000475375 ZEB2O60315 1214 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 ZFYP08048 801 aaPredicted RBP24.34■■□□□ 1.49
VPS36-203ENST00000475375 CCL23P55773 120 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 ITGA7Q13683 1181 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 ADGRE1Q14246 886 aa24.34■■□□□ 1.49
VPS36-203ENST00000475375 FSCN1Q16658 493 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms