RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PCDHB6Q9Y5E3 794 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 PCDHA8Q9Y5H6 950 aa15.72■□□□□ 0.11
TRAF4-210ENST00000475329 ADM5C9JUS6 153 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 ADAMTS3O15072 1205 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 WDR46O15213 610 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 PLA2G6O60733 806 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 LIG1P18858 919 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 NOM1Q5C9Z4 860 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 CCDC73Q6ZRK6 1079 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 CCAR1Q8IX12 1150 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 REXO1Q8N1G1 1221 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 ZNF784Q8NCA9 323 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 RASGRP4Q8TDF6 673 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 WDR18Q9BV38 432 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 DDX19AQ9NUU7 478 aaKnown RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 FEM1BQ9UK73 627 aa15.71■□□□□ 0.11
TRAF4-210ENST00000475329 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-210ENST00000475329 CUTAO60888 179 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 MARCKSP29966 332 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-210ENST00000475329 USP14P54578 494 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 FBXO11Q86XK2 927 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■□□□□ 8.2
TRAF4-210ENST00000475329 MRPS27Q92552 414 aaKnown RBP15.7■□□□□ 0.1
TRAF4-210ENST00000475329 CUL5Q93034 780 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 ZKSCAN4Q969J2 545 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-210ENST00000475329 AMNQ9BXJ7 453 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 GLT8D2Q9H1C3 349 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-210ENST00000475329 RIC8AQ9NPQ8 531 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 PRR12Q9ULL5 1215 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 COL11A1P12107 1806 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-210ENST00000475329 LOC285556D6RIA3 1793 aa15.7■□□□□ 0.1
TRAF4-210ENST00000475329 SMCHD1A6NHR9 2005 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 LETM1O95202 739 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-210ENST00000475329 PTPRAP18433 802 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 ZNF445P59923 1031 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 TRAF1Q13077 416 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 MTMR2Q13614 643 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 NONOQ15233 471 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■□□□ 12.9
TRAF4-210ENST00000475329 AXDND1Q5T1B0 1012 aaPredicted RBP15.69■□□□□ 0.1
TRAF4-210ENST00000475329 KRI1Q8N9T8 703 aaKnown RBP15.69■□□□□ 0.1
TRAF4-210ENST00000475329 PCDHA1Q9Y5I3 950 aa15.69■□□□□ 0.1
TRAF4-210ENST00000475329 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-210ENST00000475329 USP2O75604 605 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-210ENST00000475329 NF2P35240 595 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 MRPL12P52815 198 aaKnown RBP15.68■□□□□ 0.1
TRAF4-210ENST00000475329 FAM160A1Q05DH4 1040 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-210ENST00000475329 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-210ENST00000475329 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 CDCA5Q96FF9 252 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 NUP62CLQ9H1M0 184 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 GOLPH3LQ9H4A5 285 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 FZD1Q9UP38 647 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 RLFQ13129 1914 aa15.68■□□□□ 0.1
TRAF4-210ENST00000475329 NR1I2O75469 434 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 PTPREP23469 700 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 CMA1P23946 247 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 SNAP25P60880 206 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 SPP2Q13103 211 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 PRKG1Q13976 671 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 ZNF174Q15697 407 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 INF2Q27J81 1249 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 KIFC2Q96AC6 838 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 RANBP17Q9H2T7 1088 aaKnown RBP15.67■□□□□ 0.1
TRAF4-210ENST00000475329 CLSTN2Q9H4D0 955 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 PSTPIP2Q9H939 334 aa15.67■□□□□ 0.1
TRAF4-210ENST00000475329 BIN2Q9UBW5 565 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-210ENST00000475329 FBXO2Q9UK22 296 aaPredicted RBP15.67■□□□□ 0.1
TRAF4-210ENST00000475329 SYCE3A1L190 88 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 C19orf81C9J6K1 198 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 WNT7AO00755 349 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
TRAF4-210ENST00000475329 BACE1P56817 501 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-210ENST00000475329 USH1GQ495M9 461 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 JAKMIP3Q5VZ66 844 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 FERMT2Q96AC1 680 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 SLF1Q9BQI6 1058 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 TANGO6Q9C0B7 1094 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 TMEM260Q9NX78 707 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 SRPRBQ9Y5M8 271 aaKnown RBP15.66■□□□□ 0.1
TRAF4-210ENST00000475329 CSADQ9Y600 493 aa15.66■□□□□ 0.1
TRAF4-210ENST00000475329 POTECB2RU33 542 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
TRAF4-210ENST00000475329 PFKFB1P16118 471 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 VCAM1P19320 739 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 MCM7P33993 719 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 CLK2P49760 499 aaKnown RBP15.65■□□□□ 0.1
TRAF4-210ENST00000475329 ORC2Q13416 577 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-210ENST00000475329 VGLL4Q14135 290 aa15.65■□□□□ 0.1
TRAF4-210ENST00000475329 UBE2SQ16763 222 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms