RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
SSR1-205ENST00000475213 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
SSR1-205ENST00000475213 SEPT4O43236 478 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 PLA2G6O60733 806 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 FDX1P10109 184 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
SSR1-205ENST00000475213 IKQ13123 557 aaPredicted RBP14.46□□□□□ -0.09
SSR1-205ENST00000475213 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.46□□□□□ -0.09
SSR1-205ENST00000475213 C7orf61Q8IZ16 206 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 TINF2Q9BSI4 451 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 MTMR7Q9Y216 660 aa14.46□□□□□ -0.09
SSR1-205ENST00000475213 DNAJC25-GNG10A0A024R161 153 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 GSPT1P15170 499 aaKnown RBP14.45□□□□□ -0.1
SSR1-205ENST00000475213 TTC22Q5TAA0 569 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 CHST13Q8NET6 341 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 DCAF4Q8WV16 495 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 DDX11Q96FC9 970 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 TMEM47Q9BQJ4 181 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
SSR1-205ENST00000475213 NRBP1Q9UHY1 535 aa14.45□□□□□ -0.1
SSR1-205ENST00000475213 ZNF536O15090 1300 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 NEDD4P46934 1319 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 DNM1LO00429 736 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 ZNF213O14771 459 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 MAP3K13O43283 966 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 TOP1P11387 765 aaKnown RBP14.44□□□□□ -0.1
SSR1-205ENST00000475213 TAL1P17542 331 aaPredicted RBP14.44□□□□□ -0.1
SSR1-205ENST00000475213 LRRC26Q2I0M4 334 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 GJC2Q5T442 439 aaPredicted RBP14.44□□□□□ -0.1
SSR1-205ENST00000475213 ANKRD35Q8N283 1001 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 AGBL1Q96MI9 1066 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 DSCC1Q9BVC3 393 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 SENP6Q9GZR1 1112 aaPredicted RBP14.44□□□□□ -0.1
SSR1-205ENST00000475213 IL25Q9H293 177 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 PRO3102Q9H379 93 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 RNF41Q9H4P4 317 aaPredicted RBP14.44□□□□□ -0.1
SSR1-205ENST00000475213 HOMER2Q9NSB8 354 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 FBXO40Q9UH90 709 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
SSR1-205ENST00000475213 ZNF865P0CJ78 1059 aaPredicted RBP14.43□□□□□ -0.1
SSR1-205ENST00000475213 SNAP25P60880 206 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 CCDC96Q2M329 555 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 CCDC174Q6PII3 467 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 MSL3Q8N5Y2 521 aaKnown RBP14.43□□□□□ -0.1
SSR1-205ENST00000475213 ARRDC4Q8NCT1 418 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 TTC14Q96N46 770 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 ACAD9Q9H845 621 aa14.43□□□□□ -0.1
SSR1-205ENST00000475213 ZMYND8Q9ULU4 1186 aaPredicted RBP14.43□□□□□ -0.1
SSR1-205ENST00000475213 SYNGAP1Q96PV0 1343 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 SNAI1O95863 264 aaPredicted RBP14.42□□□□□ -0.1
SSR1-205ENST00000475213 FXR1P51114 621 aaKnown RBP eCLIP14.42□□□□□ -0.1
SSR1-205ENST00000475213 TKFCQ3LXA3 575 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 MAMDC4Q6UXC1 1216 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
SSR1-205ENST00000475213 ESR2Q92731 530 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 FGD4Q96M96 766 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
SSR1-205ENST00000475213 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SSR1-205ENST00000475213 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 RARBP10826 455 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 PDHBP11177 359 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 ALAS1P13196 640 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 SYN1P17600 705 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 SLC16A2P36021 539 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 LRRC41Q15345 812 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 IMMTQ16891 758 aaKnown RBP14.41□□□□□ -0.1
SSR1-205ENST00000475213 TRERF1Q96PN7 1200 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
SSR1-205ENST00000475213 CNPY2Q9Y2B0 182 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 LCTP09848 1927 aa14.41□□□□□ -0.1
SSR1-205ENST00000475213 B4E1Z4 1266 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 KDM4AO75164 1064 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 AKR1A1P14550 325 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 NT5C2P49902 561 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 ATN1P54259 1190 aaPredicted RBP14.4□□□□□ -0.1
SSR1-205ENST00000475213 CNTN2Q02246 1040 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 GDF15Q99988 308 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 A1CFQ9NQ94 594 aaKnown RBP14.4□□□□□ -0.1
SSR1-205ENST00000475213 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 LAMA3Q16787 3333 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 RAD50Q92878 1312 aa14.4□□□□□ -0.1
SSR1-205ENST00000475213 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 PGK1P00558 417 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 ICAM1P05362 532 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 CHMLP26374 656 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 ACVR2BQ13705 512 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
SSR1-205ENST00000475213 ARMCX2Q7L311 632 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms