RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SLFN13Q68D06 897 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 FAM173BQ6P4H8 233 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 MIGA2Q7L4E1 593 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 RASGRP2Q7LDG7 609 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 CCDC82Q8N4S0 544 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 SMC1BQ8NDV3 1235 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 FOXD4L4Q8WXT5 416 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-207ENST00000474825 KLRG1Q96E93 195 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 KIAA1683Q9H0B3 1180 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 TAF1DQ9H5J8 278 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-207ENST00000474825 JMJD4Q9H9V9 463 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 POLR3EQ9NVU0 708 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 RTEL1Q9NZ71 1219 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 CFAP45Q9UL16 551 aa7.63□□□□□ -1.19
ATG4A-207ENST00000474825 WDR90Q96KV7 1748 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 PNMA6FA0A0J9YX94 578 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 IQCA1LA6NCM1 817 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 BTBD18B2RXH4 712 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 STXBP3O00186 592 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 PRPF40AO75400 957 aaKnown RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 YEATS4O95619 227 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 CALML3P27482 149 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 EPHX2P34913 555 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 SAFBQ15424 915 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 TYW1BQ6NUM6 668 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 PPP1R18Q6NYC8 613 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 NOSTRINQ8IVI9 506 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 DIS3L2Q8IYB7 885 aaKnown RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 SCYL3Q8IZE3 742 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 ADGRF4Q8IZF3 695 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 LINC00301Q8NCQ3 95 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 ACER1Q8TDN7 264 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 LEO1Q8WVC0 666 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 RRP36Q96EU6 259 aaKnown RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 ZNF396Q96N95 335 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 USP28Q96RU2 1077 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 ZMYND12Q9H0C1 365 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 SH2D4AQ9H788 454 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 VCPKMTQ9H867 229 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.62□□□□□ -1.19
ATG4A-207ENST00000474825 VPS54Q9P1Q0 977 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 KCNJ14Q9UNX9 436 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 CNPY2Q9Y2B0 182 aa7.62□□□□□ -1.19
ATG4A-207ENST00000474825 UNCXA6NJT0 531 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 ZBTB5O15062 677 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 USP2O75604 605 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-207ENST00000474825 MBD3O95983 291 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 BMP3P12645 472 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 ECE1P42892 770 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 SLC1A4P43007 532 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 TRAPPC10P48553 1259 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 TOB1P50616 345 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-207ENST00000474825 UBE2HP62256 183 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 LAPTM4AQ15012 233 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 PTPAQ15257 358 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 RILPL1Q5EBL4 403 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 KIAA1755Q5JYT7 1200 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 TTBK2Q6IQ55 1244 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 PNMA8AQ86V59 439 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-207ENST00000474825 CCDC148Q8NFR7 591 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 GPT2Q8TD30 523 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 CCDC12Q8WUD4 166 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-207ENST00000474825 LPAR1Q92633 364 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 DCPSQ96C86 337 aaKnown RBP7.61□□□□□ -1.19
ATG4A-207ENST00000474825 C12orf42Q96LP6 360 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 PIGSQ96S52 555 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 UBA5Q9GZZ9 404 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 PCDHA4Q9UN74 947 aa7.61□□□□□ -1.19
ATG4A-207ENST00000474825 MYH8P13535 1937 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 FRMPD2Q68DX3 1309 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SCN4AP35499 1836 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 FAM237AA0A1B0GTK4 181 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 hCG_1642624A0A1W2PR95 340 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 PPP1R11O60927 126 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 PPP6R2O75170 966 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 GADD45BO75293 160 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 INPP5BP32019 993 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 KRT2P35908 639 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 NR5A1Q13285 461 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 NBR1Q14596 966 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SLC39A14Q15043 492 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SYDE2Q5VT97 1194 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 ANO1Q5XXA6 986 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 KCTD1Q719H9 257 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 BLIDQ8IZY5 108 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 PGBD1Q96JS3 809 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 GLIS2Q9BZE0 524 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-207ENST00000474825 CPVLQ9H3G5 476 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 GDPD2Q9HCC8 539 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 GOPCQ9HD26 462 aa7.6□□□□□ -1.19
ATG4A-207ENST00000474825 GPCPD1Q9NPB8 672 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms