RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LRCH3Q96II8 777 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
VARS-223ENST00000474643 ZNFX1Q9P2E3 1918 aaKnown RBP17.81■□□□□ 0.44
VARS-223ENST00000474643 POTEB2H3BUK9 544 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 NMT2O60551 498 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 ALAS1P13196 640 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
VARS-223ENST00000474643 HAND2P61296 217 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 ALX1Q15699 326 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 TRIM60Q495X7 471 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
VARS-223ENST00000474643 ZNF589Q86UQ0 364 aaPredicted RBP17.81■□□□□ 0.44
VARS-223ENST00000474643 INCENPQ9NQS7 918 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 RNF146Q9NTX7 359 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 DNAH12Q6ZR08 3092 aa17.81■□□□□ 0.44
VARS-223ENST00000474643 SOX1O00570 391 aaPredicted RBP17.8■□□□□ 0.44
VARS-223ENST00000474643 ORC4O43929 436 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 FGAP02671 866 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
VARS-223ENST00000474643 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 MFSD6Q6ZSS7 791 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 ZNF467Q7Z7K2 595 aaPredicted RBP17.8■□□□□ 0.44
VARS-223ENST00000474643 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 DCAF4Q8WV16 495 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 RUFY2Q8WXA3 655 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 VTI1AQ96AJ9 217 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
VARS-223ENST00000474643 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
VARS-223ENST00000474643 CCPG1Q9ULG6 757 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
VARS-223ENST00000474643 ZNF865P0CJ78 1059 aaPredicted RBP17.79■□□□□ 0.44
VARS-223ENST00000474643 TOP1P11387 765 aaKnown RBP17.79■□□□□ 0.44
VARS-223ENST00000474643 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
VARS-223ENST00000474643 PHF24Q9UPV7 400 aa17.79■□□□□ 0.44
VARS-223ENST00000474643 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 FOXP2O15409 715 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
VARS-223ENST00000474643 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
VARS-223ENST00000474643 SNAP25P60880 206 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 AGBL1Q96MI9 1066 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 STARD7Q9NQZ5 370 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 IL17RBQ9NRM6 502 aa17.78■□□□□ 0.44
VARS-223ENST00000474643 ZMYM6O95789 1325 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 A0A1W2PQ45 241 aaPredicted RBP17.77■□□□□ 0.44
VARS-223ENST00000474643 A0A1W2PQY0 241 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 ASB14A6NK59 587 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 ZNF213O14771 459 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 PCP11498 1178 aaKnown RBP17.77■□□□□ 0.44
VARS-223ENST00000474643 NSMFQ6X4W1 530 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 ARMCX2Q7L311 632 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 ESR2Q92731 530 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 GLT1D1Q96MS3 346 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 GPCPD1Q9NPB8 672 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 PRR12Q9ULL5 1215 aa17.77■□□□□ 0.44
VARS-223ENST00000474643 FRMPD2Q68DX3 1309 aaPredicted RBP17.76■□□□□ 0.43
VARS-223ENST00000474643 MOXD2PA6NHM9 499 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 PLA2G6O60733 806 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 DUSP11O75319 330 aaKnown RBP17.76■□□□□ 0.43
VARS-223ENST00000474643 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
VARS-223ENST00000474643 CHMLP26374 656 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 TLE2Q04725 743 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 AKNAD1Q5T1N1 836 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
VARS-223ENST00000474643 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
VARS-223ENST00000474643 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
VARS-223ENST00000474643 RAD50Q92878 1312 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 CLTBP09497 229 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 RAG1P15918 1043 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 ACLYP53396 1101 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 SNX17Q15036 470 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 KCNA10Q16322 511 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 GPR153Q6NV75 609 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.75■□□□□ 0.43
VARS-223ENST00000474643 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 TMEM47Q9BQJ4 181 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
VARS-223ENST00000474643 PDLIM7Q9NR12 457 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 TMEM39AQ9NV64 488 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 TACC3Q9Y6A5 838 aa17.75■□□□□ 0.43
VARS-223ENST00000474643 ADAMTS4O75173 837 aa17.74■□□□□ 0.43
VARS-223ENST00000474643 ICAM1P05362 532 aa17.74■□□□□ 0.43
VARS-223ENST00000474643 SLC16A2P36021 539 aa17.74■□□□□ 0.43
VARS-223ENST00000474643 C1orf53Q5VUE5 145 aa17.74■□□□□ 0.43
VARS-223ENST00000474643 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
VARS-223ENST00000474643 BADQ92934 168 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1144.8 ms