RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RAD21O60216 631 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 FLOT1O75955 427 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 NDUFB10O96000 172 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 HMGB1P09429 215 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 BMP3P12645 472 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 RPS6KB1P23443 525 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC1A4P43007 532 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 DGKZQ13574 1117 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TOB2Q14106 344 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 CLEC10AQ8IUN9 316 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 SMAP1Q8IYB5 467 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TMTC2Q8N394 836 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 CD99L2Q8TCZ2 262 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 EFCC1Q9HA90 598 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ZSWIM5Q9P217 1185 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 PNMA2Q9UL42 364 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 PPP1R9AQ9ULJ8 1098 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 CTDP1Q9Y5B0 961 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 A0A0G2JMZ2 1700 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 MGAMO43451 1857 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 SPDYE16A6NNV3 312 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ZBED4O75132 1171 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 LETM1O95202 739 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 FMNL1O95466 1100 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 MAPK4P31152 587 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 MCM5P33992 734 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ERVK-9P63128 1117 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ERVK-24P63145 666 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 CBX1P83916 185 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ANKRD1Q15327 319 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 KIAA1755Q5JYT7 1200 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 FAM83BQ5T0W9 1011 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 IFIT1BQ5T764 474 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 CCAR1Q8IX12 1150 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 SPICE1Q8N0Z3 855 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 LRRC47Q8N1G4 583 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 PLCD3Q8N3E9 789 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ANKRD13CQ8N6S4 541 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 PRPF38AQ8NAV1 312 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 COA7Q96BR5 231 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM87BQ96K49 555 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TFIP11Q9UBB9 837 aaKnown RBP4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 ZKSCAN5Q9Y2L8 839 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 PARP14Q460N5 1801 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 TNKSO95271 1327 aa4.82□□□□□ -1.64
GAPVD1-216ENST00000474637 IFIT3O14879 490 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF500O60304 480 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 NMT2O60551 498 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 SLC25A27O95847 323 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PTMAP06454 111 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PSMC4P43686 418 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 STAT2P52630 851 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 OAZ1P54368 228 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PLCB2Q00722 1185 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 WTAPQ15007 396 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC96Q2M329 555 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 UVSSAQ2YD98 709 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ASPRV1Q53RT3 343 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 GPATCH4Q5T3I0 446 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 MB21D2Q8IYB1 491 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TRMT44Q8IYL2 757 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ENAHQ8N8S7 591 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PNMA1Q8ND90 353 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 SHCBP1Q8NEM2 672 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TSC1Q92574 1164 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ZNF830Q96NB3 372 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 NEK1Q96PY6 1258 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 LRRC2Q9BYS8 371 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ALDH8A1Q9H2A2 487 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 RBPJLQ9UBG7 517 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CCDC39Q9UFE4 941 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 USP25Q9UHP3 1055 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ADAMTS5Q9UNA0 930 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 RLFQ13129 1914 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PRC1O43663 620 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CNMDO75829 334 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 ADCY5O95622 1261 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CALM1P0DP23 149 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CALM2P0DP24 149 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CALM3P0DP25 149 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 SNHG28P0DPA3 235 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 PDCP20941 246 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 IKQ13123 557 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 SEC23AQ15436 765 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CAMK4Q16566 473 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CSPP1Q1MSJ5 1256 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TKFCQ3LXA3 575 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 TMEM67Q5HYA8 995 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 DNTTIP2Q5QJE6 756 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 FBXO46Q6PJ61 603 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 BTNL9Q6UXG8 535 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 Q6ZUG5 572 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 STOX1Q6ZVD7 989 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CYB5R4Q7L1T6 521 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 OTOP1Q7RTM1 612 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 CATIPQ7Z7H3 387 aa4.81□□□□□ -1.64
GAPVD1-216ENST00000474637 FAM184AQ8NB25 1140 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms