RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PRPF6O94906 941 aaKnown RBP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 CALML3P27482 149 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 CASP14P31944 242 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 KRT2P35908 639 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 LONP1P36776 959 aaKnown RBP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 VAV2P52735 878 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 IFFO1Q0D2I5 559 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 KIF5AQ12840 1032 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 MAP3K12Q12852 859 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 IFIT5Q13325 482 aaKnown RBP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 KCNB1Q14721 858 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 WTAPQ15007 396 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 NTRK3Q16288 839 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 FOXR2Q6PJQ5 311 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 RAD9BQ6WBX8 426 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 MFSD6Q6ZSS7 791 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 LRP10Q7Z4F1 713 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 KIAA1328Q86T90 577 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 CAVIN3Q969G5 261 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 CABS1Q96KC9 395 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 SERTAD1Q9UHV2 236 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 RAPGEFL1Q9UHV5 662 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
CCDC93-208ENST00000474546 CAPN11Q9UMQ6 739 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.97
CCDC93-208ENST00000474546 ADAMTSL1Q8N6G6 1762 aa8.96□□□□□ -0.97
CCDC93-208ENST00000474546 MYO5AQ9Y4I1 1855 aaKnown RBP8.96□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6L10A6NI86 522 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 LGALS16A8MUM7 142 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 ERVV-2B6SEH9 535 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 IFIT3O14879 490 aaKnown RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 EIF3HO15372 352 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 PPFIA3O75145 1194 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 GYPCP04921 128 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 PCCAP05165 728 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 RHOXF2BP0C7M4 288 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 KRT9P35527 623 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 COPB1P53618 953 aaKnown RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 ZBED6P86452 979 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 DPYDQ12882 1025 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 ORC2Q13416 577 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 SLMAPQ14BN4 828 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CLUL1Q15846 466 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 MEA1Q16626 185 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 TCP11X2Q5H9J9 407 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC122Q5T0U0 273 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 AKNAD1Q5T1N1 836 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 SLC9C2Q5TAH2 1124 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CIAPIN1Q6FI81 312 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 GALNT17Q6IS24 598 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CCNI2Q6ZMN8 369 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CROCCP2Q86T23 111 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC84Q86UT8 332 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 STK11IPQ8N1F8 1099 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 RNF10Q8N5U6 811 aaKnown RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 KLHDC4Q8TBB5 520 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 MAGEC3Q8TD91 643 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 IGDCC4Q8TDY8 1250 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 XAGE2Q96GT9 111 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 DHTKD1Q96HY7 919 aaPredicted RBP8.96□□□□□ -0.98
CCDC93-208ENST00000474546 HHIPL1Q96JK4 782 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 PNKPQ96T60 521 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 RHOXF2Q9BQY4 288 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 UBAC1Q9BSL1 405 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 SLC26A6Q9BXS9 759 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 NAPBQ9H115 298 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 LY9Q9HBG7 655 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.98
CCDC93-208ENST00000474546 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ARAP2Q8WZ64 1704 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 UBR2Q8IWV8 1755 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 RGPD5Q99666 1765 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 GRID2IPA4D2P6 1211 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 VGLL3A8MV65 326 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 HMGB1P1B2RPK0 211 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 KCNJ18B7U540 433 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 H0YHG0 523 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ZBTB22O15209 634 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 FANCGO15287 622 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 DDAH1O94760 285 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 FSBPO95073 299 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC172P0C7W6 258 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ERCC3P19447 782 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 BMP6P22004 513 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 GSCP56915 257 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CABP4P57796 275 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 FMR1Q06787 632 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 KCNJ12Q14500 433 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 COBLL1Q53SF7 1204 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
CCDC93-208ENST00000474546 CCDC178Q5BJE1 867 aa8.95□□□□□ -0.98
CCDC93-208ENST00000474546 FKBP15Q5T1M5 1219 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms