RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 NCAPG2Q86XI2 1143 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 RIOX2Q8IUF8 465 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 CMTR1Q8N1G2 835 aaKnown RBP21.09■□□□□ 0.97
SNRPB-203ENST00000474384 AGBL1Q96MI9 1066 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 TEX13BQ9BXU2 312 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 HPS5Q9UPZ3 1129 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 RIPK3Q9Y572 518 aa21.09■□□□□ 0.97
SNRPB-203ENST00000474384 TNPO2O14787 897 aaKnown RBP21.08■□□□□ 0.97
SNRPB-203ENST00000474384 MGAMO43451 1857 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 ERCC3P19447 782 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 PDIA3P30101 505 aaKnown RBP21.08■□□□□ 0.97
SNRPB-203ENST00000474384 MAPK4P31152 587 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 GNAQP50148 359 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 METAP2P50579 478 aaKnown RBP eCLIP21.08■□□□□ 0.97
SNRPB-203ENST00000474384 ARHGEF6Q15052 776 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 CWC22Q9HCG8 908 aaKnown RBP21.08■□□□□ 0.97
SNRPB-203ENST00000474384 TRIM17Q9Y577 477 aa21.08■□□□□ 0.97
SNRPB-203ENST00000474384 CYTH3O43739 400 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 SLC25A27O95847 323 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 RCAN1P53805 252 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 CDC37Q16543 378 aaPredicted RBP21.07■□□□□ 0.96
SNRPB-203ENST00000474384 TMTC3Q6ZXV5 915 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 CCDC82Q8N4S0 544 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 SRBD1Q8N5C6 995 aaKnown RBP21.07■□□□□ 0.96
SNRPB-203ENST00000474384 SHCBP1Q8NEM2 672 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 LZTS2Q9BRK4 669 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 MROH8Q9H579 483 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 RIOX1Q9H6W3 641 aa21.07■□□□□ 0.96
SNRPB-203ENST00000474384 FAM217BQ9NTX9 383 aaPredicted RBP21.07■□□□□ 0.96
SNRPB-203ENST00000474384 RBM28Q9NW13 759 aaKnown RBP21.07■□□□□ 0.96
SNRPB-203ENST00000474384 ICAM1P05362 532 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 TAL1P17542 331 aaPredicted RBP21.06■□□□□ 0.96
SNRPB-203ENST00000474384 CDC27P30260 824 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 ADD1P35611 737 aaKnown RBP21.06■□□□□ 0.96
SNRPB-203ENST00000474384 ANKRD1Q15327 319 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 QRICH1Q2TAL8 776 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
SNRPB-203ENST00000474384 OTOP1Q7RTM1 612 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 GPR142Q7Z601 462 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 PLEKHH3Q7Z736 793 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 PIBF1Q8WXW3 757 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 COA7Q96BR5 231 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 ZNF274Q96GC6 653 aaPredicted RBP21.06■□□□□ 0.96
SNRPB-203ENST00000474384 PIGSQ96S52 555 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 CCPG1Q9ULG6 757 aa21.06■□□□□ 0.96
SNRPB-203ENST00000474384 BAZ2BQ9UIF8 2168 aaKnown RBP21.05■□□□□ 0.96
SNRPB-203ENST00000474384 GNRH1P01148 92 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 ALAS1P13196 640 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 SMARCA1P28370 1054 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 CCT2P78371 535 aaKnown RBP21.05■□□□□ 0.96
SNRPB-203ENST00000474384 STK3Q13188 491 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 RABEP1Q15276 862 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 CTU1Q7Z7A3 348 aaKnown RBP21.05■□□□□ 0.96
SNRPB-203ENST00000474384 HOMER1Q86YM7 354 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 MTMR8Q96EF0 704 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 HOMER2Q9NSB8 354 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
SNRPB-203ENST00000474384 ZBTB5O15062 677 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 HOXD10P28358 340 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 COPB2P35606 906 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 PPP2R5BQ15173 497 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 NCOA5Q9HCD5 579 aaKnown RBP21.04■□□□□ 0.96
SNRPB-203ENST00000474384 GABRQQ9UN88 632 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 IVNS1ABPQ9Y6Y0 642 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 DOCK3Q8IZD9 2030 aa21.04■□□□□ 0.96
SNRPB-203ENST00000474384 CCDC196A0A1B0GTZ2 297 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 PTPREP23469 700 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 PRKCZQ05513 592 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 USH1GQ495M9 461 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 FBXO11Q86XK2 927 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 RRP36Q96EU6 259 aaKnown RBP21.03■□□□□ 0.96
SNRPB-203ENST00000474384 TRERF1Q96PN7 1200 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 RNF146Q9NTX7 359 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 SRRDQ9UH36 339 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 GJD2Q9UKL4 321 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 SMCHD1A6NHR9 2005 aa21.03■□□□□ 0.96
SNRPB-203ENST00000474384 NID2Q14112 1375 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 STRNO43815 780 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 PPP1R11O60927 126 aaPredicted RBP21.02■□□□□ 0.96
SNRPB-203ENST00000474384 FUT2Q10981 343 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 TKFCQ3LXA3 575 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 MUM1L1Q5H9M0 696 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 CHST13Q8NET6 341 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 PNMA2Q9UL42 364 aa21.02■□□□□ 0.96
SNRPB-203ENST00000474384 PNMA6FA0A0J9YX94 578 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 hCG_1642624A0A1W2PR95 340 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 SLC15A5A6NIM6 579 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 FCER1AP12319 257 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 FLT3LGP49771 235 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 MORN1Q5T089 497 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 MMP19Q99542 508 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 NUDT12Q9BQG2 462 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 AMNQ9BXJ7 453 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
SNRPB-203ENST00000474384 ACAD9Q9H845 621 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 FBXO40Q9UH90 709 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 PTPN22Q9Y2R2 807 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 MYH6P13533 1939 aa21.01■□□□□ 0.95
SNRPB-203ENST00000474384 CNTNAP5Q8WYK1 1306 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms