RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RPN1P04843 607 aaKnown RBP20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 TRIM21P19474 475 aaKnown RBP20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 KRT2P35908 639 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 APBA1Q02410 837 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 ALX1Q15699 326 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 AKNAD1Q5T1N1 836 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 DDX17Q92841 729 aaKnown RBP20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 CNNM2Q9H8M5 875 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 ZNHIT6Q9NWK9 470 aaKnown RBP20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 EHD2Q9NZN4 543 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 FBXO3Q9UK99 471 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 ZNF233A6NK53 670 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 PPP1R37O75864 691 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 BMP15O95972 392 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 TNFRSF8P28908 595 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 PTGDRQ13258 359 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 TCIRG1Q13488 830 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 PTGISQ16647 500 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 IFNL3Q8IZI9 196 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 PSMB7Q99436 277 aa20.75■□□□□ 0.91
ECHDC1-214ENST00000474289 TCRBV5S4A2TA0A5A2 114 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 RASSF10A6NK89 507 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 EEF1GP26641 437 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 KLK7P49862 253 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 SEC24CP53992 1094 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 HDLBPQ00341 1268 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 NFRKBQ6P4R8 1299 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 MFSD6Q6ZSS7 791 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 KRT26Q7Z3Y9 468 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 N4BP2L2Q92802 583 aaPredicted RBP20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 CCT8L2Q96SF2 557 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 OSBPL9Q96SU4 736 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 KRT23Q9C075 422 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 B4DLN1 442 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 CXCR5P32302 372 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 IFT88Q13099 833 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 PLCB4Q15147 1175 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC96Q2M329 555 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 RIC1Q4ADV7 1423 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 ZNF654Q8IZM8 581 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 IQCKQ8N0W5 287 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 MYCBPAPQ8TBZ2 947 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 PHF20Q9BVI0 1012 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 TSGA10Q9BZW7 698 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 RMND1Q9NWS8 449 aa20.74■□□□□ 0.91
ECHDC1-214ENST00000474289 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 PRDM1O75626 825 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 SRGNP10124 158 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 PRLRP16471 622 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 NR1D1P20393 614 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 DNM2P50570 870 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 ATP2C1P98194 919 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 WLSQ5T9L3 541 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 EMC10Q5UCC4 262 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 NLRP14Q86W24 1093 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 ADSSL1Q8N142 457 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC43Q96MW1 224 aaKnown RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 TACC1O75410 805 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 NF2P35240 595 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 ATP2B2Q01814 1243 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 C8orf74Q6P047 294 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 MIEF2Q96C03 454 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 RNF26Q9BY78 433 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 CENPHQ9H3R5 247 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 MLXIPQ9HAP2 919 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 SLC40A1Q9NP59 571 aa20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 IQSEC3Q9UPP2 1182 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-214ENST00000474289 MYH2Q9UKX2 1941 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 hCG_1642624A0A1W2PR95 340 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC189A1A4V9 331 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 PATL2C9JE40 543 aaKnown RBP20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 XBP1P17861 261 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 ZBED6P86452 979 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 PKN1Q16512 942 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 TTC38Q5R3I4 469 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 CEP85LQ5SZL2 805 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 SH2D4AQ9H788 454 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 MOCS3O95396 460 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 CFAP58Q5T655 872 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC181Q5TID7 509 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 ODF2LQ9ULJ1 636 aa20.72■□□□□ 0.91
ECHDC1-214ENST00000474289 ERICH2A1L162 156 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 FAM153BP0C7A2 387 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 TCP1P17987 556 aaKnown RBP20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 FAM153CQ494X1 144 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 VEZTQ9HBM0 779 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 RBM12Q9NTZ6 932 aaKnown RBP20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 EXOC1Q9NV70 894 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 FAM153AQ9UHL3 310 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 HYOU1Q9Y4L1 999 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 TIAM2Q8IVF5 1701 aa20.71■□□□□ 0.91
ECHDC1-214ENST00000474289 PLEKP08567 350 aaPredicted RBP20.7■□□□□ 0.91
ECHDC1-214ENST00000474289 SPA17Q15506 151 aa20.7■□□□□ 0.91
ECHDC1-214ENST00000474289 METTL24Q5JXM2 366 aa20.7■□□□□ 0.91
ECHDC1-214ENST00000474289 C6orf89Q6UWU4 347 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms