RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, human

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SVIL-208	ENST00000474106	LMBRD1	Q9NUN5	540 aa		13.75	□□□□□ -0.21
SVIL-208	ENST00000474106	BIN2	Q9UBW5	565 aa	Predicted RBP	13.75	□□□□□ -0.21
SVIL-208	ENST00000474106	CFAP45	Q9UL16	551 aa		13.75	□□□□□ -0.21
SVIL-208	ENST00000474106	CLIC4	Q9Y696	253 aa		13.75	□□□□□ -0.21
SVIL-208	ENST00000474106	hCG_1984214	I3L0E3	225 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	GADD45B	O75293	160 aa	Predicted RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	ADCY7	P51828	1080 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	MKRN3	Q13064	507 aa	Known RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	STK38	Q15208	465 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	NPY5R	Q15761	445 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	CSPP1	Q1MSJ5	1256 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	EARS2	Q5JPH6	523 aa	Known RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	JAKMIP3	Q5VZ66	844 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	CHADL	Q6NUI6	762 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	ERO1B	Q86YB8	467 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	ZNF713	Q8N859	430 aa	Predicted RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	RGS22	Q8NE09	1264 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	SLC10A4	Q96EP9	437 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	AMN	Q9BXJ7	453 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	GBA2	Q9HCG7	927 aa	Predicted RBP	13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	TMEM260	Q9NX78	707 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	PCDHA1	Q9Y5I3	950 aa		13.74	□□□□□ -0.21
SVIL-208	ENST00000474106	CCDC194	A0A1B0GVG4	234 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	IRF6	O14896	467 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	PTMS	P20962	102 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	GNA11	P29992	359 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	SF3A1	Q15459	793 aa	Known RBP	13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	UBE2S	Q16763	222 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	CPXCR1	Q8N123	301 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	C2orf69	Q8N8R5	385 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	LEO1	Q8WVC0	666 aa	Predicted RBP	13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	PGBD1	Q96JS3	809 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	ZMYND12	Q9H0C1	365 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	RANBP17	Q9H2T7	1088 aa	Known RBP	13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	NOL7	Q9UMY1	257 aa	Known RBP	13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	PCDHA6	Q9UN73	950 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	PCDHA8	Q9Y5H6	950 aa		13.73	□□□□□ -0.21
SVIL-208	ENST00000474106	GOLGA6L4	A6NEF3	574 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	SPDYE5	A6NIY4	337 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	TRAK2	O60296	914 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	ZBED4	O75132	1171 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	PPAT	Q06203	517 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	MAP3K11	Q16584	847 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	ANO1	Q5XXA6	986 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	PPP1R18	Q6NYC8	613 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	PRPF38A	Q8NAV1	312 aa	Known RBP	13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	RBM46	Q8TBY0	533 aa	Known RBP	13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	BICD2	Q8TD16	824 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	CUL5	Q93034	780 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	RAVER2	Q9HCJ3	691 aa	Known RBP	13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	DDX49	Q9Y6V7	483 aa	Known RBP	13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	SRCAP	Q6ZRS2	3230 aa		13.72	□□□□□ -0.21
SVIL-208	ENST00000474106	PLA2G6	O60733	806 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	TOB1	P50616	345 aa	Predicted RBP	13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	ZNF174	Q15697	407 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	TREML2	Q5T2D2	321 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	GALNT17	Q6IS24	598 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	DAGLB	Q8NCG7	672 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	TNFRSF25	Q93038	417 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	ATG4C	Q96DT6	458 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	C12orf42	Q96LP6	360 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	AGBL1	Q96MI9	1066 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	PSTPIP2	Q9H939	334 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	RTEL1	Q9NZ71	1219 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	CCPG1	Q9ULG6	757 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	PPP1R9A	Q9ULJ8	1098 aa		13.71	□□□□□ -0.21
SVIL-208	ENST00000474106	ESYT2	A0FGR8	921 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L15	C9J2P7	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L13	C9JLJ4	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L11	C9JVI0	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L18	D6R9N7	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L22	D6RA61	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L17	D6RBQ6	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L19	D6RCP7	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L20	D6RJB6	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	MARCKS	P29966	332 aa	Predicted RBP	13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	GJA5	P36382	358 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	ME1	P48163	572 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	MRPL12	P52815	198 aa	Known RBP	13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L24	Q0WX57	530 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	PPIL2	Q13356	520 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	INF2	Q27J81	1249 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	RILPL1	Q5EBL4	403 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	SH3D19	Q5HYK7	790 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	TTC38	Q5R3I4	469 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	LDLRAD1	Q5T700	205 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	ATL3	Q6DD88	541 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	USP17L6P	Q6QN14	398 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	CATSPERG	Q6ZRH7	1159 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	KRT25	Q7Z3Z0	450 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	REXO1	Q8N1G1	1221 aa	Known RBP	13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	TMEM87A	Q8NBN3	555 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	WNK4	Q96J92	1243 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	RIC8A	Q9NPQ8	531 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	HOMER2	Q9NSB8	354 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	PCDHB6	Q9Y5E3	794 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106	PTPRF	P10586	1907 aa		13.7	□□□□□ -0.22
SVIL-208	ENST00000474106		A0A0G2JLL6	359 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms