RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 DNAJC5GQ8N7S2 189 aa7.23□□□□□ -1.25
FN1-219ENST00000474036 C12orf49Q9H741 205 aa7.23□□□□□ -1.25
FN1-219ENST00000474036 CBX8Q9HC52 389 aa7.23□□□□□ -1.25
FN1-219ENST00000474036 PPP4R2Q9NY27 417 aa7.23□□□□□ -1.25
FN1-219ENST00000474036 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
FN1-219ENST00000474036 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
FN1-219ENST00000474036 LY75O60449 1722 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 KIAA1210Q9ULL0 1709 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 XRCC5P13010 732 aaKnown RBP7.22□□□□□ -1.25
FN1-219ENST00000474036 ZNF124Q15973 351 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 C12orf40Q86WS4 652 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 TNKS2Q9H2K2 1166 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 MKNK2Q9HBH9 465 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 SSU72Q9NP77 194 aaKnown RBP7.22□□□□□ -1.25
FN1-219ENST00000474036 TRPM1Q7Z4N2 1603 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 C5P01031 1676 aa7.22□□□□□ -1.25
FN1-219ENST00000474036 EIF3AQ14152 1382 aaKnown RBP7.21□□□□□ -1.25
FN1-219ENST00000474036 LTN1O94822 1766 aa7.21□□□□□ -1.25
FN1-219ENST00000474036 GIPC1O14908 333 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 RING1Q06587 406 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 ATG4DQ86TL0 474 aaPredicted RBP7.21□□□□□ -1.26
FN1-219ENST00000474036 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 HRASLS5Q96KN8 279 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 SIN3AQ96ST3 1273 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 TAF1LQ8IZX4 1826 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
FN1-219ENST00000474036 BRD4O60885 1362 aaPredicted RBP7.2□□□□□ -1.26
FN1-219ENST00000474036 CCDC88AQ3V6T2 1871 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 USP17L7P0C7H9 530 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 ERCC3P19447 782 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 GSTT1P30711 240 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 PTPN11Q06124 597 aaPredicted RBP7.2□□□□□ -1.26
FN1-219ENST00000474036 NKPD1Q17RQ9 610 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 FAM168AQ92567 244 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 YTHDC1Q96MU7 727 aaKnown RBP7.2□□□□□ -1.26
FN1-219ENST00000474036 FAM161BQ96MY7 647 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 TFCP2L1Q9NZI6 479 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 FAM8A1Q9UBU6 413 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 PARP2Q9UGN5 583 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 PNPLA7Q6ZV29 1317 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
FN1-219ENST00000474036 QRICH2Q9H0J4 1663 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 TMEM265A0A087WTH1 108 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 CENPBP07199 599 aaPredicted RBP7.19□□□□□ -1.26
FN1-219ENST00000474036 HSPA1AP0DMV8 641 aaKnown RBP7.19□□□□□ -1.26
FN1-219ENST00000474036 HSPA1BP0DMV9 641 aaKnown RBP7.19□□□□□ -1.26
FN1-219ENST00000474036 ARHGAP27Q6ZUM4 889 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
FN1-219ENST00000474036 FRMD6Q96NE9 622 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 AATKQ6ZMQ8 1374 aa7.19□□□□□ -1.26
FN1-219ENST00000474036 TNRC6CQ9HCJ0 1690 aaKnown RBP7.19□□□□□ -1.26
FN1-219ENST00000474036 TNS2Q63HR2 1409 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 ABCC6O95255 1503 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 TOMM70O94826 608 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 EOMESO95936 686 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 CELA3AP09093 270 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 EIF4BP23588 611 aaKnown RBP7.18□□□□□ -1.26
FN1-219ENST00000474036 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
FN1-219ENST00000474036 DAB2P98082 770 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 ZBTB37Q5TC79 503 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 C16orf71Q8IYS4 520 aaPredicted RBP7.18□□□□□ -1.26
FN1-219ENST00000474036 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 NMRK2Q9NPI5 230 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.18□□□□□ -1.26
FN1-219ENST00000474036 CPDO75976 1380 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 USP6P35125 1406 aa7.18□□□□□ -1.26
FN1-219ENST00000474036 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 BIN1O00499 593 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 FGD1P98174 961 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 INPP5AQ14642 412 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 IGSF1Q8N6C5 1336 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 RGPD2P0DJD1 1756 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 SPATA31E1Q6ZUB1 1445 aa7.17□□□□□ -1.26
FN1-219ENST00000474036 SBF1O95248 1867 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 BRCA1P38398 1863 aaKnown RBP7.16□□□□□ -1.26
FN1-219ENST00000474036 EXOC5O00471 708 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 GCP02774 474 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 CDK8P49336 464 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 TMC4Q7Z404 712 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 JMYQ8N9B5 988 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 FBRSQ9HAH7 460 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 PPM1HQ9ULR3 514 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 ACEP12821 1306 aa7.16□□□□□ -1.26
FN1-219ENST00000474036 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 IGF2BP3O00425 579 aaKnown RBP eCLIP7.15□□□□□ -1.262e-31■□□□□ 9.4
FN1-219ENST00000474036 CTSHP09668 335 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 PSMD2Q13200 908 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 ANGEL2Q5VTE6 544 aaKnown RBP7.15□□□□□ -1.26
FN1-219ENST00000474036 FYB2Q5VWT5 728 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 LLGL2Q6P1M3 1020 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 SLC23A3Q6PIS1 610 aa7.15□□□□□ -1.26
FN1-219ENST00000474036 LRFN4Q6PJG9 635 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms