RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LMBRD1Q9NUN5 540 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 EGFL7Q9UHF1 273 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 STRCP1A6NGW2 1772 aa6.94□□□□□ -1.3
ATPAF1-204ENST00000474020 GOLGA6L4A6NEF3 574 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 EYA2O00167 538 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 TM4SF5O14894 197 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 FSCN2O14926 492 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 SLC27A2O14975 620 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ALX3O95076 343 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ZFYP08048 801 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ACPPP15309 386 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 RFX5P48382 616 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 PTPN12Q05209 780 aaKnown RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 NECTIN1Q15223 517 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 FOXD4L6Q3SYB3 417 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 FOXD4L3Q6VB84 417 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 Q6ZS46 218 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 GJD3Q8N144 294 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 FAM184AQ8NB25 1140 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 KLHL23Q8NBE8 558 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 FOXD4L4Q8WXT5 416 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 TTC14Q96N46 770 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ALDH8A1Q9H2A2 487 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 CTNNA3Q9UI47 895 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 ZNF335Q9H4Z2 1342 aaPredicted RBP6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 MED23Q9ULK4 1368 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
ATPAF1-204ENST00000474020 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 VPS37CA5D8V6 355 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 H3BRJ5 948 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 ICMTO60725 284 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PHACTR2O75167 634 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 F13A1P00488 732 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PCCAP05165 728 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 RPS6KB1P23443 525 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 UBE2HP62256 183 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PTH1RQ03431 593 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 IFIT5Q13325 482 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PKP1Q13835 747 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 TTC39AQ5SRH9 613 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 LRP10Q7Z4F1 713 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 CCDC83Q8IWF9 413 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 KBTBD3Q8NAB2 608 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 FAM227BQ96M60 508 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 ARID3AQ99856 593 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 TSPY26PQ9H489 355 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 CCDC87Q9NVE4 849 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 DBNLQ9UJU6 430 aaKnown RBP6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 SH3TC1Q8TE82 1336 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 PALLDQ8WX93 1383 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 ABCC12Q96J65 1359 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 ARFGEF2Q9Y6D5 1785 aa6.92□□□□□ -1.3
ATPAF1-204ENST00000474020 A0A0D9SFI3 127 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 EXOC5O00471 708 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 EREGO14944 169 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 A1BGP04217 495 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 IFIT1P09914 478 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 GJB2P29033 226 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 CDC25BP30305 580 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 PIP4K2AP48426 406 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 KRT85P78386 507 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 TTF1Q15361 905 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 HS1BP3Q53T59 392 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 EPHA10Q5JZY3 1008 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 CCDC183Q5T5S1 534 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 LARP1BQ659C4 914 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 AGGF1Q8N302 714 aaeCLIP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 KLHDC4Q8TBB5 520 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 WNT8BQ93098 351 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 DBNDD2Q9BQY9 259 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 RGS17Q9UGC6 210 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 ZDHHC9Q9Y397 364 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 CDHR2Q9BYE9 1310 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 RPAP1Q9BWH6 1393 aaPredicted RBP6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 KCPQ6ZWJ8 1503 aa6.91□□□□□ -1.3
ATPAF1-204ENST00000474020 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 ANKRD18BA2A2Z9 1011 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 H3BQV1 296 aa6.9□□□□□ -1.3
ATPAF1-204ENST00000474020 GOLIM4O00461 696 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms