RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SFMBT1Q9UHJ3 866 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 MAPRE3Q9UPY8 281 aa5.86□□□□□ -1.47
BRCA1-212ENST00000473961 SF3B6Q9Y3B4 125 aaKnown RBP5.86□□□□□ -1.47
BRCA1-212ENST00000473961 PDE8AO60658 829 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 S100BP04271 92 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-212ENST00000473961 PABPC1P11940 636 aaKnown RBP5.85□□□□□ -1.47
BRCA1-212ENST00000473961 L1CAMP32004 1257 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 STAT3P40763 770 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 PREPP48147 710 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 AMPD3Q01432 767 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 GRB10Q13322 594 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 KSR1Q8IVT5 923 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 PPM1KQ8N3J5 372 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 FLCNQ8NFG4 579 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 KCTD13Q8WZ19 329 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 ZNF512BQ96KM6 892 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-212ENST00000473961 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 PRDM10Q9NQV6 1147 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 DDX56Q9NY93 547 aaKnown RBP5.85□□□□□ -1.47
BRCA1-212ENST00000473961 SUSD2Q9UGT4 822 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 DIS3Q9Y2L1 958 aaKnown RBP5.85□□□□□ -1.47
BRCA1-212ENST00000473961 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
BRCA1-212ENST00000473961 ALG1L2C9J202 215 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 IRS4O14654 1257 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-212ENST00000473961 PRODHO43272 600 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 MARCH6O60337 910 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 CPP00450 1065 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 NAT1P18440 290 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 RXRBP28702 533 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 FLT3P36888 993 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 GABREP78334 506 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 FAM209AQ5JX71 171 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 TRIM59Q8IWR1 403 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 DHX37Q8IY37 1157 aaKnown RBP5.84□□□□□ -1.47
BRCA1-212ENST00000473961 DNAJB8Q8NHS0 232 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 PPP1R13LQ8WUF5 828 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 DSCC1Q9BVC3 393 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 HOMER2Q9NSB8 354 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 APEX2Q9UBZ4 518 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 TPX2Q9ULW0 747 aaKnown RBP5.84□□□□□ -1.47
BRCA1-212ENST00000473961 EMC9Q9Y3B6 208 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 ZNF451Q9Y4E5 1061 aa5.84□□□□□ -1.47
BRCA1-212ENST00000473961 RAPGEF3O95398 923 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 PMLP29590 882 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 HOXC12P31275 282 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 KIR3DL1P43629 444 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 CPSF6Q16630 551 aaKnown RBP eCLIP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 CCDC181Q5TID7 509 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 PAOXQ6QHF9 649 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 NOL8Q76FK4 1167 aaKnown RBP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 UBE3DQ7Z6J8 389 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 ARHGEF39Q8N4T4 335 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 EZH1Q92800 747 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 IER2Q9BTL4 223 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 OSBPL1AQ9BXW6 950 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 SEMA6CQ9H3T2 930 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 BSDC1Q9NW68 430 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 CGGBP1Q9UFW8 167 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-212ENST00000473961 ATP8A1Q9Y2Q0 1164 aa5.83□□□□□ -1.48
BRCA1-212ENST00000473961 B4E1Z4 1266 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 KCNH1O95259 989 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 PDGFRBP09619 1106 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 ITIH2P19823 946 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 KCNJ6P48051 423 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 RBM10P98175 930 aaKnown RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 NFKB2Q00653 900 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 AMPD2Q01433 879 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 MAP4K2Q12851 820 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 TRIM61Q5EBN2 209 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 CWF19L1Q69YN2 538 aaKnown RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 MAMDC2Q7Z304 686 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 CDH24Q86UP0 819 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 LRRTM3Q86VH5 581 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 THNSL2Q86YJ6 484 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 C1QL4Q86Z23 238 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 RPUSD2Q8IZ73 545 aaKnown RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 SHISA5Q8N114 240 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 FBXL6Q8N531 539 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 ADCY4Q8NFM4 1077 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 IRF2BPLQ9H1B7 796 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 NOL6Q9H6R4 1146 aaKnown RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 PRDM5Q9NQX1 630 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-212ENST00000473961 GTF2IRD1Q9UHL9 959 aa5.82□□□□□ -1.48
BRCA1-212ENST00000473961 FAM95CA0A1B0GW59 222 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 KCNQ2O43526 872 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 SLITRK5O94991 958 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 NPTXRO95502 500 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 SNRPB2P08579 225 aaKnown RBP5.81□□□□□ -1.48
BRCA1-212ENST00000473961 NFICP08651 508 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 POU4F1Q01851 419 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 PLEKHG6Q3KR16 790 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 HSP90AB2PQ58FF8 381 aa5.81□□□□□ -1.48
BRCA1-212ENST00000473961 YOD1Q5VVQ6 348 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-212ENST00000473961 FOXB2Q5VYV0 432 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms