RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 PDE6AP16499 860 aa19.6■□□□□ 0.73
HPS4-210ENST00000473782 CXCL17Q6UXB2 119 aa19.6■□□□□ 0.73
HPS4-210ENST00000473782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.6■□□□□ 0.73
HPS4-210ENST00000473782 TRPV6Q9H1D0 765 aa19.6■□□□□ 0.73
HPS4-210ENST00000473782 ABHD16BQ9H3Z7 469 aa19.6■□□□□ 0.73
HPS4-210ENST00000473782 CERS4Q9HA82 394 aa19.6■□□□□ 0.73
HPS4-210ENST00000473782 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 PRKAB2O43741 272 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 B4GALT4O60513 344 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 CA3P07451 260 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 ATP2A2P16615 1042 aaKnown RBP19.59■□□□□ 0.73
HPS4-210ENST00000473782 CDK8P49336 464 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 OS9Q13438 667 aaPredicted RBP19.59■□□□□ 0.73
HPS4-210ENST00000473782 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 SNRNP48Q6IEG0 339 aaKnown RBP19.59■□□□□ 0.73
HPS4-210ENST00000473782 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 TEX13BQ9BXU2 312 aa19.59■□□□□ 0.73
HPS4-210ENST00000473782 ITGA7Q13683 1181 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 SLC9C2Q5TAH2 1124 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 ARMCX2Q7L311 632 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 SCLYQ96I15 445 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 CCDC17Q96LX7 622 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 NUP88Q99567 741 aaPredicted RBP19.58■□□□□ 0.72
HPS4-210ENST00000473782 SPC25Q9HBM1 224 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 GNEQ9Y223 722 aaKnown RBP19.58■□□□□ 0.72
HPS4-210ENST00000473782 WDFY4Q6ZS81 3184 aa19.58■□□□□ 0.72
HPS4-210ENST00000473782 MCM3APO60318 1980 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 ATP2A1O14983 1001 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 LPXNO60711 386 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 SPRED2Q7Z698 418 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 BRWD1Q9NSI6 2320 aa19.57■□□□□ 0.72
HPS4-210ENST00000473782 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 C12orf60Q5U649 245 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 C16orf86Q6ZW13 317 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 CCDC144CPQ8IYA2 1237 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 HLA-CQ95604 372 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 SLF1Q9BQI6 1058 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 KANSL2Q9H9L4 492 aa19.56■□□□□ 0.72
HPS4-210ENST00000473782 TAP1Q03518 808 aa19.55■□□□□ 0.72
HPS4-210ENST00000473782 TMEM63BQ5T3F8 832 aa19.55■□□□□ 0.72
HPS4-210ENST00000473782 RPUSD2Q8IZ73 545 aaKnown RBP19.55■□□□□ 0.72
HPS4-210ENST00000473782 CLUAP1Q96AJ1 413 aa19.55■□□□□ 0.72
HPS4-210ENST00000473782 C1orf115Q9H7X2 142 aa19.55■□□□□ 0.72
HPS4-210ENST00000473782 ARMT1Q9H993 441 aa19.55■□□□□ 0.72
HPS4-210ENST00000473782 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
HPS4-210ENST00000473782 GTPBP6O43824 516 aaPredicted RBP19.54■□□□□ 0.72
HPS4-210ENST00000473782 PSMC6P62333 389 aa19.54■□□□□ 0.72
HPS4-210ENST00000473782 CNTN2Q02246 1040 aa19.54■□□□□ 0.72
HPS4-210ENST00000473782 TMEM57Q8N5G2 664 aa19.54■□□□□ 0.72
HPS4-210ENST00000473782 GOPCQ9HD26 462 aa19.54■□□□□ 0.72
HPS4-210ENST00000473782 CABYRO75952 493 aa19.53■□□□□ 0.72
HPS4-210ENST00000473782 TNFAIP2Q03169 654 aa19.53■□□□□ 0.72
HPS4-210ENST00000473782 GRB10Q13322 594 aa19.53■□□□□ 0.72
HPS4-210ENST00000473782 CPXCR1Q8N123 301 aa19.53■□□□□ 0.72
HPS4-210ENST00000473782 RAVER2Q9HCJ3 691 aaKnown RBP19.53■□□□□ 0.72
HPS4-210ENST00000473782 DDX49Q9Y6V7 483 aaKnown RBP19.53■□□□□ 0.72
HPS4-210ENST00000473782 PRR33A8MZF0 331 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 USP17L12C9JPN9 530 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 USP17L21D6R901 530 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 CHGBP05060 677 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 MRE11P49959 708 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 FSCN1Q16658 493 aaKnown RBP19.52■□□□□ 0.72
HPS4-210ENST00000473782 FAM133AQ8N9E0 248 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 ARNTL2Q8WYA1 636 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 ATP8A2Q9NTI2 1148 aa19.52■□□□□ 0.72
HPS4-210ENST00000473782 MYH8P13535 1937 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 SOWAHBA6NEL2 793 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 RAD21O60216 631 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 SMPD1P17405 629 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 TTF1Q15361 905 aaPredicted RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 TLK2Q86UE8 772 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 ANKRD35Q8N283 1001 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 ALDH8A1Q9H2A2 487 aaPredicted RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 SLC38A10Q9HBR0 1119 aa19.51■□□□□ 0.71
HPS4-210ENST00000473782 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
HPS4-210ENST00000473782 F5H6K3 240 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 NDUFB10O96000 172 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 CYP2C9P11712 490 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 KLRC3Q07444 240 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 AACSQ86V21 672 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 SNX27Q96L92 541 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 SEZ6LQ9BYH1 1024 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 PDGFCQ9NRA1 345 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
HPS4-210ENST00000473782 IPO8O15397 1037 aaKnown RBP19.49■□□□□ 0.71
HPS4-210ENST00000473782 DYNC1LI2O43237 492 aaPredicted RBP19.49■□□□□ 0.71
HPS4-210ENST00000473782 MBD4O95243 580 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 PFKMP08237 780 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 TAPT1Q6NXT6 567 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 CTR9Q6PD62 1173 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 DEFB128Q7Z7B8 93 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 CHST13Q8NET6 341 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 PHOSPHO2Q8TCD6 241 aa19.49■□□□□ 0.71
HPS4-210ENST00000473782 SCN5AQ14524 2016 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms