RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 FGAP02671 866 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 ZNF589Q86UQ0 364 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-217ENST00000473720 CHST13Q8NET6 341 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 EXOC6Q8TAG9 804 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 BADQ92934 168 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 ACAD9Q9H845 621 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 RNF146Q9NTX7 359 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-217ENST00000473720 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 FRMPD2Q68DX3 1309 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-217ENST00000473720 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 GBF1Q92538 1859 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
SMPD4-217ENST00000473720 IGHDP01880 384 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-217ENST00000473720 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
SMPD4-217ENST00000473720 SLC16A2P36021 539 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 OAZ1P54368 228 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-217ENST00000473720 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 ARMCX2Q7L311 632 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 GMCL1Q96IK5 515 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 TRERF1Q96PN7 1200 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 PRR12Q9ULL5 1215 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 PHF24Q9UPV7 400 aa14.12□□□□□ -0.15
SMPD4-217ENST00000473720 TRIM43BA6NCK2 446 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 POTEB2H3BUK9 544 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 FDX1P10109 184 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 TLE2Q04725 743 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 ALX1Q15699 326 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 KCNA10Q16322 511 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 MUM1L1Q5H9M0 696 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 TTBK2Q6IQ55 1244 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 MAMDC4Q6UXC1 1216 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
SMPD4-217ENST00000473720 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 CCDC144CPQ8IYA2 1237 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
SMPD4-217ENST00000473720 TRIM43Q96BQ3 446 aaPredicted RBP14.11□□□□□ -0.15
SMPD4-217ENST00000473720 FGD4Q96M96 766 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 GPCPD1Q9NPB8 672 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 STARD7Q9NQZ5 370 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 CCPG1Q9ULG6 757 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 DDX49Q9Y6V7 483 aaKnown RBP14.11□□□□□ -0.15
SMPD4-217ENST00000473720 ZNF536O15090 1300 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 CCDC171Q6TFL3 1326 aa14.11□□□□□ -0.15
SMPD4-217ENST00000473720 KIAA1217Q5T5P2 1943 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ADCY6O43306 1168 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ORC4O43929 436 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ADAMTS4O75173 837 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 CLTBP09497 229 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ACLYP53396 1101 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 SNX17Q15036 470 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 SHHQ15465 462 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 EEPD1Q7L9B9 569 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
SMPD4-217ENST00000473720 FAM161BQ96MY7 647 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 ABHD16BQ9H3Z7 469 aa14.1□□□□□ -0.15
SMPD4-217ENST00000473720 A1CFQ9NQ94 594 aaKnown RBP14.1□□□□□ -0.15
SMPD4-217ENST00000473720 DUSP11O75319 330 aaKnown RBP14.09□□□□□ -0.15
SMPD4-217ENST00000473720 RAG1P15918 1043 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 SDSP20132 328 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 CWC27Q6UX04 472 aaKnown RBP14.09□□□□□ -0.15
SMPD4-217ENST00000473720 MFSD6Q6ZSS7 791 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 PLEKHM2Q8IWE5 1019 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 SMC5Q8IY18 1101 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 SLC17A8Q8NDX2 589 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 ZKSCAN3Q9BRR0 538 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 TMEM39AQ9NV64 488 aa14.09□□□□□ -0.15
SMPD4-217ENST00000473720 MYO9BQ13459 2157 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 SOWAHBA6NEL2 793 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 ITGB8P26012 769 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 TKFCQ3LXA3 575 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 GNASQ5JWF2 1037 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 FAM133AQ8N9E0 248 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 PURBQ96QR8 312 aaKnown RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 TSEN34Q9BSV6 310 aaKnown RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
SMPD4-217ENST00000473720 TRIP12Q14669 1992 aaPredicted RBP14.08□□□□□ -0.16
SMPD4-217ENST00000473720 COL6A3P12111 3177 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms