RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 SNRNP48Q6IEG0 339 aaKnown RBP22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 RAB11FIP4Q86YS3 637 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 MTMR8Q96EF0 704 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 PORCNQ9H237 461 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 CPVLQ9H3G5 476 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 MROH8Q9H579 483 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 JMJD4Q9H9V9 463 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 RAVER2Q9HCJ3 691 aaKnown RBP22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 HPS5Q9UPZ3 1129 aa22.07■■□□□ 1.12
CTDSP1-207ENST00000473420 CCDC196A0A1B0GTZ2 297 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 DHX16O60231 1041 aaKnown RBP22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 CTGFP29279 349 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 PDIA3P30101 505 aaKnown RBP22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 CDC37Q16543 378 aaPredicted RBP22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 TKFCQ3LXA3 575 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 TMTC3Q6ZXV5 915 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 CCAR1Q8IX12 1150 aaKnown RBP22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 CCDC144CPQ8IYA2 1237 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 CPXCR1Q8N123 301 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 TRIM47Q96LD4 638 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 ARHGAP39Q9C0H5 1083 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 NAP1L2Q9ULW6 460 aaPredicted RBP22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 DOCK3Q8IZD9 2030 aa22.06■■□□□ 1.12
CTDSP1-207ENST00000473420 RBBP6Q7Z6E9 1792 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 TNPO2O14787 897 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 FMNL1O95466 1100 aaPredicted RBP22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 ERCC3P19447 782 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 CCDC174Q6PII3 467 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 NBPF11Q86T75 865 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 COA7Q96BR5 231 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 EFCC1Q9HA90 598 aa22.05■■□□□ 1.12
CTDSP1-207ENST00000473420 ZNFX1Q9P2E3 1918 aaKnown RBP22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 BAZ2BQ9UIF8 2168 aaKnown RBP22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 CYTH3O43739 400 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 PLEKHA8P1O95397 391 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 HOXD10P28358 340 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 PRMT2P55345 433 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 SNAP25P60880 206 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 CAP1Q01518 475 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 GPR142Q7Z601 462 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 PLEKHH3Q7Z736 793 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 NCAPG2Q86XI2 1143 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 SRBD1Q8N5C6 995 aaKnown RBP22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 CHST13Q8NET6 341 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 CWC22Q9HCG8 908 aaKnown RBP22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 FAM217BQ9NTX9 383 aaPredicted RBP22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 CCPG1Q9ULG6 757 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
CTDSP1-207ENST00000473420 ZBTB5O15062 677 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 STRNO43815 780 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 CDC27P30260 824 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 QRICH1Q2TAL8 776 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 OTOP1Q7RTM1 612 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 CTU1Q7Z7A3 348 aaKnown RBP22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 AGBL1Q96MI9 1066 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 VAT1LQ9HCJ6 419 aa22.03■■□□□ 1.12
CTDSP1-207ENST00000473420 TRAF1Q13077 416 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 ABRAQ8N0Z2 381 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 PIGSQ96S52 555 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 TPCN1Q9ULQ1 816 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 RIPK3Q9Y572 518 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 TRIM17Q9Y577 477 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 IVNS1ABPQ9Y6Y0 642 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 CNTNAP5Q8WYK1 1306 aa22.02■■□□□ 1.12
CTDSP1-207ENST00000473420 PNMA6FA0A0J9YX94 578 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 SLC15A5A6NIM6 579 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 PTPREP23469 700 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 WDR78Q5VTH9 848 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 FBXO11Q86XK2 927 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 SOCS4Q8WXH5 440 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 RRP36Q96EU6 259 aaKnown RBP22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 AMNQ9BXJ7 453 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 ACAD9Q9H845 621 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 SRRDQ9UH36 339 aa22.01■■□□□ 1.11
CTDSP1-207ENST00000473420 PLXNA1Q9UIW2 1896 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 ST18O60284 1047 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 ALAS1P13196 640 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 ADD1P35611 737 aaKnown RBP22■■□□□ 1.11
CTDSP1-207ENST00000473420 FUT2Q10981 343 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 GRB14Q14449 540 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 PKN2Q16513 984 aaKnown RBP22■■□□□ 1.11
CTDSP1-207ENST00000473420 MORN1Q5T089 497 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 HOMER1Q86YM7 354 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 TRERF1Q96PN7 1200 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 NUDT12Q9BQG2 462 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
CTDSP1-207ENST00000473420 RNF146Q9NTX7 359 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 SEC63Q9UGP8 760 aaKnown RBP22■■□□□ 1.11
CTDSP1-207ENST00000473420 ABCB11O95342 1321 aa22■■□□□ 1.11
CTDSP1-207ENST00000473420 PFKFB2O60825 505 aa21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 ECM2O94769 699 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 FCER1AP12319 257 aa21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 CCT2P78371 535 aaKnown RBP21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 CMTR1Q8N1G2 835 aaKnown RBP21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 MAF1Q9H063 256 aa21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 SLKQ9H2G2 1235 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-207ENST00000473420 GJD2Q9UKL4 321 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms