RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 USP17L21D6R901 530 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 VWA5AO00534 786 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 PRKAB2O43741 272 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 EEF2P13639 858 aaKnown RBP8.3□□□□□ -1.08
CKS1B-205ENST00000473344 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 CDK8P49336 464 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 ACLYP53396 1101 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 FOSBP53539 338 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
CKS1B-205ENST00000473344 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 ZSCAN25Q6NSZ9 544 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 CCDC174Q6PII3 467 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 SIAH1Q8IUQ4 282 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 DDX11Q96FC9 970 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 FBXO28Q9NVF7 368 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 NAV1Q8NEY1 1877 aa8.3□□□□□ -1.08
CKS1B-205ENST00000473344 A0A0G2JMZ2 1700 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 CYP2D7A0A087X1C5 515 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 GOLGA8CPA6NN73 597 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 KIAA0355O15063 1070 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MS4A1P11836 297 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 TAL1P17542 331 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 DNAJB2P25686 324 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ITGB8P26012 769 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ADD2P35612 726 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ZNF792Q3KQV3 632 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 FAM83BQ5T0W9 1011 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 RPAP2Q8IXW5 612 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MSL3Q8N5Y2 521 aaKnown RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 VTI1AQ96AJ9 217 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 GLT1D1Q96MS3 346 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 TEX13BQ9BXU2 312 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MKNK2Q9HBH9 465 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ZHX1Q9UKY1 873 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ZNF214Q9UL59 606 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 FAM184BQ9ULE4 1060 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 SLC4A4Q9Y6R1 1079 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MYO5AQ9Y4I1 1855 aaKnown RBP8.29□□□□□ -1.08
CKS1B-205ENST00000473344 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 SYNRGQ9UMZ2 1314 aa8.29□□□□□ -1.08
CKS1B-205ENST00000473344 CUL9Q8IWT3 2517 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ROBO3Q96MS0 1386 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 TIMP1P01033 207 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ZNF865P0CJ78 1059 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 EPHB4P54760 987 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 FAAP100Q0VG06 881 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 UBE3CQ15386 1083 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 KCNA10Q16322 511 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 GLIPR1L2Q4G1C9 344 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ANKRD33Q7Z3H0 272 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 PRPF38AQ8NAV1 312 aaKnown RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 PANK1Q8TE04 598 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 LENG1Q96BZ8 264 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 TIFAQ96CG3 184 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 TOX2Q96NM4 488 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 SLF1Q9BQI6 1058 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-205ENST00000473344 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
CKS1B-205ENST00000473344 BHMG1C9JSJ3 638 aaPredicted RBP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 F5H6K3 240 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 ZBED4O75132 1171 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 DUSP11O75319 330 aaKnown RBP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 ATP5JP18859 108 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 KLRC3Q07444 240 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 PPIGQ13427 754 aaKnown RBP eCLIP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 TJAP1Q5JTD0 557 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 CTR9Q6PD62 1173 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 CPXCR1Q8N123 301 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 STK11IPQ8N1F8 1099 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 TMEM199Q8N511 208 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 GAS2L1Q99501 681 aaPredicted RBP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 NUP88Q99567 741 aaPredicted RBP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 HAUS7Q99871 368 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 CHMP4BQ9H444 224 aaKnown RBP8.27□□□□□ -1.09
CKS1B-205ENST00000473344 ZNF576Q9H609 170 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 ZNF287Q9HBT7 754 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 RLFQ13129 1914 aa8.27□□□□□ -1.09
CKS1B-205ENST00000473344 ELP1O95163 1332 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms