RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ACAD9Q9H845 621 aa26.5■■□□□ 1.83
PTP4A1-203ENST00000473334 SGSM2O43147 1006 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 SNAP25P60880 206 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 SYDE2Q5VT97 1194 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 CCDC174Q6PII3 467 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 MSL3Q8N5Y2 521 aaKnown RBP26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 GPCPD1Q9NPB8 672 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 RNF146Q9NTX7 359 aa26.49■■□□□ 1.83
PTP4A1-203ENST00000473334 PFASO15067 1338 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 SNHG28P0DPA3 235 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 COL6A1P12109 1028 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 SLC16A2P36021 539 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 PTH1RQ03431 593 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 ZSCAN10Q96SZ4 725 aaPredicted RBP26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 RANBP17Q9H2T7 1088 aaKnown RBP26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 ZSWIM5Q9P217 1185 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 CEP290O15078 2479 aa26.48■■□□□ 1.83
PTP4A1-203ENST00000473334 SYNGAP1Q96PV0 1343 aa26.47■■□□□ 1.83
PTP4A1-203ENST00000473334 ALAS1P13196 640 aa26.47■■□□□ 1.83
PTP4A1-203ENST00000473334 ZNF543Q08ER8 600 aa26.47■■□□□ 1.83
PTP4A1-203ENST00000473334 ZNF467Q7Z7K2 595 aaPredicted RBP26.47■■□□□ 1.83
PTP4A1-203ENST00000473334 TRERF1Q96PN7 1200 aa26.47■■□□□ 1.83
PTP4A1-203ENST00000473334 ICAM1P05362 532 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 ANO1Q5XXA6 986 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 MAMDC4Q6UXC1 1216 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 PNMA1Q8ND90 353 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 ANKS1AQ92625 1134 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 KAT14Q9H8E8 782 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 CCPG1Q9ULG6 757 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 CNPY2Q9Y2B0 182 aa26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 U3KPZ7 1027 aaPredicted RBP26.46■■□□□ 1.83
PTP4A1-203ENST00000473334 TNKSO95271 1327 aa26.45■■□□□ 1.83
PTP4A1-203ENST00000473334 DNM1LO00429 736 aa26.45■■□□□ 1.82
PTP4A1-203ENST00000473334 GPATCH4Q5T3I0 446 aaKnown RBP26.45■■□□□ 1.82
PTP4A1-203ENST00000473334 ENAHQ8N8S7 591 aaPredicted RBP26.45■■□□□ 1.82
PTP4A1-203ENST00000473334 A1CFQ9NQ94 594 aaKnown RBP26.45■■□□□ 1.82
PTP4A1-203ENST00000473334 SMCHD1A6NHR9 2005 aa26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 CYP21A2P08686 494 aa26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 ZNF865P0CJ78 1059 aaPredicted RBP26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 TAL1P17542 331 aaPredicted RBP26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 ARRDC4Q8NCT1 418 aa26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 FGD4Q96M96 766 aa26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 UBAC1Q9BSL1 405 aa26.44■■□□□ 1.82
PTP4A1-203ENST00000473334 POTEB2H3BUK9 544 aa26.43■■□□□ 1.82
PTP4A1-203ENST00000473334 TRDNQ13061 729 aa26.43■■□□□ 1.82
PTP4A1-203ENST00000473334 C7orf61Q8IZ16 206 aa26.43■■□□□ 1.82
PTP4A1-203ENST00000473334 MCM3APO60318 1980 aa26.43■■□□□ 1.82
PTP4A1-203ENST00000473334 SNAI1O95863 264 aaPredicted RBP26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 RARBP10826 455 aa26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 AKR1A1P14550 325 aa26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 MUM1L1Q5H9M0 696 aa26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 GJC2Q5T442 439 aaPredicted RBP26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 FAM133AQ8N9E0 248 aa26.42■■□□□ 1.82
PTP4A1-203ENST00000473334 KBTBD13C9JR72 458 aa26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 CNTN2Q02246 1040 aa26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 MAP4K1Q92918 833 aa26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 SENP6Q9GZR1 1112 aaPredicted RBP26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 PNMA2Q9UL42 364 aa26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 COLQQ9Y215 455 aaPredicted RBP26.41■■□□□ 1.82
PTP4A1-203ENST00000473334 GOLGA8HP0CJ92 632 aa26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 BMP2KLQ5H9B9 411 aa26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 HABP4Q5JVS0 413 aaKnown RBP26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 IFIT1BQ5T764 474 aaKnown RBP26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 CYB5R4Q7L1T6 521 aa26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 ARMCX2Q7L311 632 aa26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 XPNPEP3Q9NQH7 507 aa26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 ZHX1Q9UKY1 873 aaPredicted RBP26.4■■□□□ 1.82
PTP4A1-203ENST00000473334 LRRC41Q15345 812 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 LRRC26Q2I0M4 334 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 ASPRV1Q53RT3 343 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 CHRDL2Q6WN34 429 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 SKAP1Q86WV1 359 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 ABHD16BQ9H3Z7 469 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 CYP39A1Q9NYL5 469 aa26.39■■□□□ 1.82
PTP4A1-203ENST00000473334 LCTP09848 1927 aa26.39■■□□□ 1.81
PTP4A1-203ENST00000473334 WDR19Q8NEZ3 1342 aa26.39■■□□□ 1.81
PTP4A1-203ENST00000473334 DNAH12Q6ZR08 3092 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 E7EWF7 191 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 MYCNP04198 464 aaPredicted RBP26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 ACVR2BQ13705 512 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 SEC23AQ15436 765 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 NSMFQ6X4W1 530 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 KIAA1211Q6ZU35 1233 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 RALYLQ86SE5 291 aaKnown RBP26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 CCDC144CPQ8IYA2 1237 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 UBA5Q9GZZ9 404 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 FAM184BQ9ULE4 1060 aa26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 RBM8AQ9Y5S9 174 aaKnown RBP26.38■■□□□ 1.81
PTP4A1-203ENST00000473334 SOWAHBA6NEL2 793 aa26.37■■□□□ 1.81
PTP4A1-203ENST00000473334 SLC34A2O95436 690 aa26.37■■□□□ 1.81
PTP4A1-203ENST00000473334 NCOA7Q8NI08 942 aa26.37■■□□□ 1.81
PTP4A1-203ENST00000473334 ESYT1Q9BSJ8 1104 aa26.37■■□□□ 1.81
PTP4A1-203ENST00000473334 TAF6LQ9Y6J9 622 aa26.37■■□□□ 1.81
PTP4A1-203ENST00000473334 LRRC37A2A6NM11 1700 aa26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 ASB14A6NK59 587 aa26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 PARP1P09874 1014 aaKnown RBP26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 LENG1Q96BZ8 264 aaPredicted RBP26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 CCDC136Q96JN2 1154 aa26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 CPVLQ9H3G5 476 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms