RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CEP290O15078 2479 aa18.31■□□□□ 0.52
MRPL55-226ENST00000473066 SEPT4O43236 478 aa18.3■□□□□ 0.52
MRPL55-226ENST00000473066 PDHBP11177 359 aa18.3■□□□□ 0.52
MRPL55-226ENST00000473066 LHX8Q68G74 356 aa18.3■□□□□ 0.52
MRPL55-226ENST00000473066 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
MRPL55-226ENST00000473066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
MRPL55-226ENST00000473066 CCPG1Q9ULG6 757 aa18.3■□□□□ 0.52
MRPL55-226ENST00000473066 TNKSO95271 1327 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 SGSM2O43147 1006 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 GPATCH4Q5T3I0 446 aaKnown RBP18.29■□□□□ 0.52
MRPL55-226ENST00000473066 RALYLQ86SE5 291 aaKnown RBP18.29■□□□□ 0.52
MRPL55-226ENST00000473066 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
MRPL55-226ENST00000473066 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 AGBL1Q96MI9 1066 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 ZSCAN10Q96SZ4 725 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-226ENST00000473066 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
MRPL55-226ENST00000473066 MKI67P46013 3256 aaKnown RBP18.29■□□□□ 0.52
MRPL55-226ENST00000473066 PFASO15067 1338 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 KBTBD13C9JR72 458 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 H0YGN5 161 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 POTEB2H3BUK9 544 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 IGHA2P01877 340 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 SLC16A2P36021 539 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 TRERF1Q96PN7 1200 aa18.28■□□□□ 0.52
MRPL55-226ENST00000473066 RANBP17Q9H2T7 1088 aaKnown RBP18.28■□□□□ 0.52
MRPL55-226ENST00000473066 ZNF536O15090 1300 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 DNAJC25-GNG10A0A024R161 153 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-226ENST00000473066 ICAM1P05362 532 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 SNAP25P60880 206 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 IFIT1BQ5T764 474 aaKnown RBP18.27■□□□□ 0.52
MRPL55-226ENST00000473066 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 ZNF467Q7Z7K2 595 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-226ENST00000473066 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
MRPL55-226ENST00000473066 LRRC37A2A6NM11 1700 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 LCTP09848 1927 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 ERICH2A1L162 156 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 DNM1LO00429 736 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 SNHG28P0DPA3 235 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 RARBP10826 455 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 AKR1A1P14550 325 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 PTH1RQ03431 593 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 C7orf61Q8IZ16 206 aa18.26■□□□□ 0.51
MRPL55-226ENST00000473066 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-226ENST00000473066 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
MRPL55-226ENST00000473066 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-226ENST00000473066 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
MRPL55-226ENST00000473066 CYP21A2P08686 494 aa18.25■□□□□ 0.51
MRPL55-226ENST00000473066 MNX1P50219 401 aaPredicted RBP18.25■□□□□ 0.51
MRPL55-226ENST00000473066 SART3Q15020 963 aaKnown RBP18.25■□□□□ 0.51
MRPL55-226ENST00000473066 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
MRPL55-226ENST00000473066 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
MRPL55-226ENST00000473066 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
MRPL55-226ENST00000473066 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
MRPL55-226ENST00000473066 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
MRPL55-226ENST00000473066 MAMDC4Q6UXC1 1216 aa18.24■□□□□ 0.51
MRPL55-226ENST00000473066 ANKS1AQ92625 1134 aa18.24■□□□□ 0.51
MRPL55-226ENST00000473066 XPNPEP3Q9NQH7 507 aa18.24■□□□□ 0.51
MRPL55-226ENST00000473066 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-226ENST00000473066 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
MRPL55-226ENST00000473066 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 ASB14A6NK59 587 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 PARP1P09874 1014 aaKnown RBP18.23■□□□□ 0.51
MRPL55-226ENST00000473066 COL6A1P12109 1028 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-226ENST00000473066 ARMCX2Q7L311 632 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 ESYT1Q9BSJ8 1104 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-226ENST00000473066 ABHD16BQ9H3Z7 469 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 FAM184BQ9ULE4 1060 aa18.23■□□□□ 0.51
MRPL55-226ENST00000473066 E7EWF7 191 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
MRPL55-226ENST00000473066 ZNF865P0CJ78 1059 aaPredicted RBP18.22■□□□□ 0.51
MRPL55-226ENST00000473066 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
MRPL55-226ENST00000473066 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 RNF180Q86T96 592 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 ANO2Q9NQ90 1003 aa18.22■□□□□ 0.51
MRPL55-226ENST00000473066 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 ACVR2BQ13705 512 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 WTAPQ15007 396 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 LRRC41Q15345 812 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 CYP39A1Q9NYL5 469 aa18.21■□□□□ 0.51
MRPL55-226ENST00000473066 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.51
MRPL55-226ENST00000473066 SNAI1O95863 264 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms