RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RTN1Q16799 776 aa23.22■■□□□ 1.31
SF1-213ENST00000472725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.22■■□□□ 1.312e-12■□□□□ 10.2
SF1-213ENST00000472725 EFCC1Q9HA90 598 aa23.22■■□□□ 1.31
SF1-213ENST00000472725 FBXO40Q9UH90 709 aa23.22■■□□□ 1.31
SF1-213ENST00000472725 ZNF536O15090 1300 aa23.22■■□□□ 1.31
SF1-213ENST00000472725 GOLGA8AA7E2F4 631 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 GOLGA8BA8MQT2 603 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 METAP2P50579 478 aaKnown RBP eCLIP23.21■■□□□ 1.31
SF1-213ENST00000472725 PKN2Q16513 984 aaKnown RBP23.21■■□□□ 1.31
SF1-213ENST00000472725 SNRNP48Q6IEG0 339 aaKnown RBP23.21■■□□□ 1.31
SF1-213ENST00000472725 CTU1Q7Z7A3 348 aaKnown RBP23.21■■□□□ 1.31
SF1-213ENST00000472725 ABRAQ8N0Z2 381 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 CPXCR1Q8N123 301 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 CHST13Q8NET6 341 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 TRIM47Q96LD4 638 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 MAF1Q9H063 256 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 PORCNQ9H237 461 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
SF1-213ENST00000472725 MYH6P13533 1939 aa23.21■■□□□ 1.31
SF1-213ENST00000472725 DHX16O60231 1041 aaKnown RBP23.2■■□□□ 1.3
SF1-213ENST00000472725 ERCC3P19447 782 aa23.2■■□□□ 1.3
SF1-213ENST00000472725 PDIA3P30101 505 aaKnown RBP23.2■■□□□ 1.3
SF1-213ENST00000472725 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
SF1-213ENST00000472725 TMTC3Q6ZXV5 915 aa23.2■■□□□ 1.3
SF1-213ENST00000472725 GPR142Q7Z601 462 aa23.2■■□□□ 1.3
SF1-213ENST00000472725 PLEKHH3Q7Z736 793 aa23.2■■□□□ 1.3
SF1-213ENST00000472725 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
SF1-213ENST00000472725 IVNS1ABPQ9Y6Y0 642 aa23.2■■□□□ 1.3
SF1-213ENST00000472725 ZBTB5O15062 677 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 PEX10O60683 326 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 RXRAP19793 462 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 AK2P54819 239 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 NCAPG2Q86XI2 1143 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 SOCS4Q8WXH5 440 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 CCPG1Q9ULG6 757 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 NAP1L2Q9ULW6 460 aaPredicted RBP23.19■■□□□ 1.3
SF1-213ENST00000472725 HPS5Q9UPZ3 1129 aa23.19■■□□□ 1.3
SF1-213ENST00000472725 ZNF236Q9UL36 1845 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 CYTH3O43739 400 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 CTGFP29279 349 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 CCDC174Q6PII3 467 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 OTOP1Q7RTM1 612 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 CCDC144CPQ8IYA2 1237 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 ARHGAP39Q9C0H5 1083 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 CPVLQ9H3G5 476 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 SRRDQ9UH36 339 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 TRIM17Q9Y577 477 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 DOCK3Q8IZD9 2030 aa23.18■■□□□ 1.3
SF1-213ENST00000472725 PNMA6FA0A0J9YX94 578 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 SLC15A5A6NIM6 579 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 ST18O60284 1047 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 PTPREP23469 700 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 QRICH1Q2TAL8 776 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 NBPF11Q86T75 865 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 SRBD1Q8N5C6 995 aaKnown RBP23.17■■□□□ 1.3
SF1-213ENST00000472725 RRP36Q96EU6 259 aaKnown RBP23.17■■□□□ 1.3
SF1-213ENST00000472725 AGBL1Q96MI9 1066 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 AMNQ9BXJ7 453 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 VAT1LQ9HCJ6 419 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
SF1-213ENST00000472725 RBM27Q9P2N5 1060 aaKnown RBP23.17■■□□□ 1.3
SF1-213ENST00000472725 PLXNB2O15031 1838 aa23.17■■□□□ 1.3
SF1-213ENST00000472725 PLEKHA8P1O95397 391 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 FCER1AP12319 257 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 IRF5Q13568 498 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 GRB14Q14449 540 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 NUDT12Q9BQG2 462 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 ACAD9Q9H845 621 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
SF1-213ENST00000472725 RIPK3Q9Y572 518 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 ZSWIM8A7E2V4 1837 aa23.16■■□□□ 1.3
SF1-213ENST00000472725 ABCB11O95342 1321 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 CDC27P30260 824 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 CAP1Q01518 475 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 SLC35G1Q2M3R5 365 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 MORN1Q5T089 497 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 WDR78Q5VTH9 848 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 CPLX2Q6PUV4 134 aaKnown RBP23.15■■□□□ 1.3
SF1-213ENST00000472725 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 TRERF1Q96PN7 1200 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 SLC5A4Q9NY91 659 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 GJD2Q9UKL4 321 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 TPCN1Q9ULQ1 816 aa23.15■■□□□ 1.3
SF1-213ENST00000472725 BAZ2BQ9UIF8 2168 aaKnown RBP23.15■■□□□ 1.3
SF1-213ENST00000472725 ZNFX1Q9P2E3 1918 aaKnown RBP23.14■■□□□ 1.3
SF1-213ENST00000472725 PFKFB2O60825 505 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 ALAS1P13196 640 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 ADD1P35611 737 aaKnown RBP23.14■■□□□ 1.29
SF1-213ENST00000472725 SNAP25P60880 206 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 FUT2Q10981 343 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 KCTD2Q14681 263 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 SAMD3Q8N6K7 520 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 PIGSQ96S52 555 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 SLKQ9H2G2 1235 aaPredicted RBP23.14■■□□□ 1.29
SF1-213ENST00000472725 RNF146Q9NTX7 359 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 LIMCH1Q9UPQ0 1083 aa23.14■■□□□ 1.29
SF1-213ENST00000472725 MRPL11Q9Y3B7 192 aaKnown RBP23.14■■□□□ 1.29
SF1-213ENST00000472725 CNTNAP5Q8WYK1 1306 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms