RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FARP2O94887 1054 aaPredicted RBP10.87□□□□□ -0.67
SMC4-213ENST00000472282 S1PR4O95977 384 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 HMGCRP04035 888 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 CHMLP26374 656 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 CDK8P49336 464 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 USP14P54578 494 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 HABP4Q5JVS0 413 aaKnown RBP10.87□□□□□ -0.67
SMC4-213ENST00000472282 MORN1Q5T089 497 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
SMC4-213ENST00000472282 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 IL25Q9H293 177 aa10.87□□□□□ -0.67
SMC4-213ENST00000472282 RAD50Q92878 1312 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 FOXP2O15409 715 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
SMC4-213ENST00000472282 APPP05067 770 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 TDO2P48775 406 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
SMC4-213ENST00000472282 MAP3K21Q5TCX8 1036 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
SMC4-213ENST00000472282 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 STK11IPQ8N1F8 1099 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 DPF3Q92784 378 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 FLRT1Q9NZU1 646 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
SMC4-213ENST00000472282 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 RABGAP1Q9Y3P9 1069 aa10.86□□□□□ -0.67
SMC4-213ENST00000472282 RPTORQ8N122 1335 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
SMC4-213ENST00000472282 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
SMC4-213ENST00000472282 MAPK4P31152 587 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 LBX2Q6XYB7 198 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 PLEKHH3Q7Z736 793 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 AMOTL1Q8IY63 956 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 SPICE1Q8N0Z3 855 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
SMC4-213ENST00000472282 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 SOCS4Q8WXH5 440 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 PAWRQ96IZ0 340 aaKnown RBP10.85□□□□□ -0.67
SMC4-213ENST00000472282 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMC4-213ENST00000472282 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 NAPBQ9H115 298 aa10.85□□□□□ -0.67
SMC4-213ENST00000472282 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
SMC4-213ENST00000472282 SMCHD1A6NHR9 2005 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 MINDY4BA8MYZ0 360 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 SGSM2O43147 1006 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 CDC45O75419 566 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
SMC4-213ENST00000472282 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
SMC4-213ENST00000472282 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
SMC4-213ENST00000472282 ICA1Q05084 483 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
SMC4-213ENST00000472282 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 WDR78Q5VTH9 848 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 TMX2Q9Y320 296 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 ZMYM6O95789 1325 aa10.84□□□□□ -0.67
SMC4-213ENST00000472282 MCM3APO60318 1980 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 ZKSCAN1P17029 563 aaPredicted RBP10.83□□□□□ -0.68
SMC4-213ENST00000472282 RASA1P20936 1047 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 RGS2P41220 211 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMC4-213ENST00000472282 PRR20EP86478 221 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 PRR20CP86479 221 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 PRR20DP86480 221 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 PRR20BP86481 221 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 PRR20AP86496 221 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 COG2Q14746 738 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 PKDCCQ504Y2 493 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 SBK1Q52WX2 424 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
SMC4-213ENST00000472282 SCUBE3Q8IX30 993 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 ATG4CQ96DT6 458 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 APBA2Q99767 749 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 HTATIP2Q9BUP3 242 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
SMC4-213ENST00000472282 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 FBXO28Q9NVF7 368 aa10.83□□□□□ -0.68
SMC4-213ENST00000472282 SLC15A5A6NIM6 579 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 FGAP02671 866 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 CCNA1P78396 465 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 PPARAQ07869 468 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 GRB14Q14449 540 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 ALX1Q15699 326 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 CCDC17Q96LX7 622 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 ESYT1Q9BSJ8 1104 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 DSCC1Q9BVC3 393 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 ARHGEF10LQ9HCE6 1279 aa10.82□□□□□ -0.68
SMC4-213ENST00000472282 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms