RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
APLF-204ENST00000471727 CCDC17Q96LX7 622 aa11.99□□□□□ -0.49
APLF-204ENST00000471727 GLT8D2Q9H1C3 349 aa11.99□□□□□ -0.49
APLF-204ENST00000471727 KBTBD4Q9NVX7 518 aa11.99□□□□□ -0.49
APLF-204ENST00000471727 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
APLF-204ENST00000471727 IGKV6D-41A0A0C4DH26 115 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 RHOBTB3O94955 611 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 HLA-DOAP06340 250 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 STX17P56962 302 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
APLF-204ENST00000471727 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 IGSF22Q8N9C0 903 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 TSC1Q92574 1164 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 MTRQ99707 1265 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
APLF-204ENST00000471727 RAB34Q9BZG1 259 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
APLF-204ENST00000471727 PSMA7O14818 248 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 TTLL1O95922 423 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 SRGNP10124 158 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 FECHP22830 423 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 EEF1GP26641 437 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 KARSQ15046 597 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 COBLL1Q53SF7 1204 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 TRIM65Q6PJ69 517 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 USP17L2Q6R6M4 530 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 CABP7Q86V35 215 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 ADSSL1Q8N142 457 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 REXO1Q8N1G1 1221 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 DHTKD1Q96HY7 919 aaPredicted RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 LRRC27Q9C0I9 530 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 EHD4Q9H223 541 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 BLZF1Q9H2G9 400 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 TMEM60Q9H2L4 133 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 THAP9Q9H5L6 903 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 SERPINB13Q9UIV8 391 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 BICDL2A1A5D9 508 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 G3V3G9 751 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 N4BP3O15049 544 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 PLSCR1O15162 318 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 CCDC175P0C221 793 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 PDHBP11177 359 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 HDLBPQ00341 1268 aaKnown RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 NAALADL2Q58DX5 795 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 TCP11X2Q5H9J9 407 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 DPP8Q6V1X1 898 aaPredicted RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 PODNQ7Z5L7 613 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 TMTC1Q8IUR5 882 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 GIMAP8Q8ND71 665 aaPredicted RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
APLF-204ENST00000471727 CALML4Q96GE6 196 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 PIGSQ96S52 555 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 DNAI1Q9UI46 699 aa11.97□□□□□ -0.49
APLF-204ENST00000471727 A0A1W2PQC6 194 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 ADAMTS3O15072 1205 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 TEX33O43247 280 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 SLC26A4O43511 780 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 CCNT1O60563 726 aaKnown RBP11.96□□□□□ -0.5
APLF-204ENST00000471727 MFAP3LO75121 409 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 TRIM37O94972 964 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 CASP1P29466 404 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 PRCPP42785 496 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 ADCY7P51828 1080 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.5
APLF-204ENST00000471727 ADKP55263 362 aaKnown RBP11.96□□□□□ -0.5
APLF-204ENST00000471727 PDIA5Q14554 519 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 KRT31Q15323 416 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 TMEM266Q2M3C6 531 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 LETM2Q2VYF4 491 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 HSP90AA4PQ58FG1 418 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 MCTP2Q6DN12 878 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 FAM114A1Q8IWE2 563 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 STAMQ92783 540 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 TEKT1Q969V4 418 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 IQCDQ96DY2 449 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.5
APLF-204ENST00000471727 USP40Q9NVE5 1235 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 STK17AQ9UEE5 414 aa11.96□□□□□ -0.5
APLF-204ENST00000471727 TTF2Q9UNY4 1162 aaKnown RBP11.96□□□□□ -0.5
APLF-204ENST00000471727 PNMA6FA0A0J9YX94 578 aa11.95□□□□□ -0.5
APLF-204ENST00000471727 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
APLF-204ENST00000471727 KCNJ18B7U540 433 aa11.95□□□□□ -0.5
APLF-204ENST00000471727 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
APLF-204ENST00000471727 CASQ1P31415 396 aa11.95□□□□□ -0.5
APLF-204ENST00000471727 HSPA1LP34931 641 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms