RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 AMIGO3Q86WK7 504 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 ANKLE2Q86XL3 938 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 LRRC56Q8IYG6 542 aaPredicted RBP5.38□□□□□ -1.55
COPS3-206ENST00000471414 KLHL6Q8WZ60 621 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 SEC16BQ96JE7 1060 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 KLHL25Q9H0H3 589 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 AP5S1Q9NUS5 200 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 SMG5Q9UPR3 1016 aaKnown RBP5.38□□□□□ -1.55
COPS3-206ENST00000471414 SLC12A7Q9Y666 1083 aa5.38□□□□□ -1.55
COPS3-206ENST00000471414 WTIPA6NIX2 430 aaPredicted RBP5.37□□□□□ -1.55
COPS3-206ENST00000471414 FGF10O15520 208 aaPredicted RBP5.37□□□□□ -1.55
COPS3-206ENST00000471414 TMEM253P0C7T8 217 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 DLG4P78352 724 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 KIR3DS1Q14943 382 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 FBXW10Q5XX13 1052 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 ZNF605Q86T29 641 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 FIBCD1Q8N539 461 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 ZNF513Q8N8E2 541 aaPredicted RBP5.37□□□□□ -1.55
COPS3-206ENST00000471414 HAUS7Q99871 368 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 PHAXQ9H814 394 aaKnown RBP5.37□□□□□ -1.55
COPS3-206ENST00000471414 SUSD2Q9UGT4 822 aa5.37□□□□□ -1.55
COPS3-206ENST00000471414 OR14I1A6ND48 311 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 TP53P04637 393 aaPredicted RBP5.36□□□□□ -1.55
COPS3-206ENST00000471414 NASPP49321 788 aaPredicted RBP5.36□□□□□ -1.55
COPS3-206ENST00000471414 LINC00310P59036 64 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 SLC14A2Q15849 920 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 FAM169BQ8N8A8 192 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 KCNN1Q92952 543 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 FCRL3Q96P31 734 aaPredicted RBP5.36□□□□□ -1.55
COPS3-206ENST00000471414 JMJD8Q96S16 334 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 DSCC1Q9BVC3 393 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 CDADC1Q9BWV3 514 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 ACBD3Q9H3P7 528 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 TNFRSF12AQ9NP84 129 aa5.36□□□□□ -1.55
COPS3-206ENST00000471414 MBD1Q9UIS9 605 aaPredicted RBP5.36□□□□□ -1.55
COPS3-206ENST00000471414 NPIPB6E9PJ23 425 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 ITGA4P13612 1032 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 PDE6BP35913 854 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 CBX2Q14781 532 aaPredicted RBP5.35□□□□□ -1.55
COPS3-206ENST00000471414 ADGRF1Q5T601 910 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 CYP2R1Q6VVX0 501 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 SIRT2Q8IXJ6 389 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 BRF1Q92994 677 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 WHRNQ9P202 907 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 KLHL14Q9P2G3 628 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 TAF6LQ9Y6J9 622 aa5.35□□□□□ -1.55
COPS3-206ENST00000471414 TCAF2A6NFQ2 919 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 GSTM1P09488 218 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 PRKCAP17252 672 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 VIPR1P32241 457 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 MVKQ03426 396 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 LAPTM5Q13571 262 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 CWF19L1Q69YN2 538 aaKnown RBP5.34□□□□□ -1.55
COPS3-206ENST00000471414 RCSD1Q6JBY9 416 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 ZSCAN18Q8TBC5 510 aaPredicted RBP5.34□□□□□ -1.55
COPS3-206ENST00000471414 RCC1LQ96I51 464 aaKnown RBP5.34□□□□□ -1.55
COPS3-206ENST00000471414 MCMBPQ9BTE3 642 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 FAM86C1Q9NVL1 165 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 IMPACTQ9P2X3 320 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 PCDHB10Q9UN67 800 aa5.34□□□□□ -1.55
COPS3-206ENST00000471414 DIS3Q9Y2L1 958 aaKnown RBP5.34□□□□□ -1.55
COPS3-206ENST00000471414 SF3B6Q9Y3B4 125 aaKnown RBP5.34□□□□□ -1.55
COPS3-206ENST00000471414 IRS4O14654 1257 aaPredicted RBP5.33□□□□□ -1.56
COPS3-206ENST00000471414 EPHX1P07099 455 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 MSL3P1P0C860 447 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 IFNGR1P15260 489 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 ATF4P18848 351 aaPredicted RBP5.33□□□□□ -1.56
COPS3-206ENST00000471414 CORO7P57737 925 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 SLC7A5Q01650 507 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 NOL9Q5SY16 702 aaKnown RBP5.33□□□□□ -1.56
COPS3-206ENST00000471414 ARHGEF39Q8N4T4 335 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 NLGN2Q8NFZ4 835 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 PTCHD1Q96NR3 888 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 NOL6Q9H6R4 1146 aaKnown RBP5.33□□□□□ -1.56
COPS3-206ENST00000471414 CNTD2Q9H8S5 307 aa5.33□□□□□ -1.56
COPS3-206ENST00000471414 ABLIM1O14639 778 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 AURKAO14965 403 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 SRGAP3O43295 1099 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 ZSCAN22P10073 491 aaPredicted RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 SDHBP21912 280 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 NOP2P46087 812 aaKnown RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 POU4F1Q01851 419 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 TCEAL1Q15170 157 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 GNPTABQ3T906 1256 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 HLA-DQA1Q5Y7H0 255 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 SGPP1Q9BX95 441 aa5.32□□□□□ -1.56
COPS3-206ENST00000471414 EPB41L4AQ9HCS5 686 aaPredicted RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 CGGBP1Q9UFW8 167 aaPredicted RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 ARID1BQ8NFD5 2236 aaPredicted RBP5.32□□□□□ -1.56
COPS3-206ENST00000471414 IRS2Q9Y4H2 1338 aa5.31□□□□□ -1.56
COPS3-206ENST00000471414 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
COPS3-206ENST00000471414 N4BP3O15049 544 aa5.31□□□□□ -1.56
COPS3-206ENST00000471414 CDR1P51861 262 aa5.31□□□□□ -1.56
COPS3-206ENST00000471414 EPHB3P54753 998 aa5.31□□□□□ -1.56
COPS3-206ENST00000471414 CYP4F8P98187 520 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms