RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CYP2R1Q6VVX0 501 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 KLHL25Q9H0H3 589 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 GBP3Q9H0R5 595 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 CAPN10Q9HC96 672 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 GPR55Q9Y2T6 319 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-202ENST00000471307 TAF6LQ9Y6J9 622 aa9.14□□□□□ -0.95
CCDC39-202ENST00000471307 TMEM253P0C7T8 217 aa9.13□□□□□ -0.95
CCDC39-202ENST00000471307 PDE6BP35913 854 aa9.13□□□□□ -0.95
CCDC39-202ENST00000471307 GNL2Q13823 731 aaKnown RBP9.13□□□□□ -0.95
CCDC39-202ENST00000471307 PPP2R5EQ16537 467 aa9.13□□□□□ -0.95
CCDC39-202ENST00000471307 HSF5Q4G112 596 aaPredicted RBP9.13□□□□□ -0.95
CCDC39-202ENST00000471307 HEATR6Q6AI08 1181 aaKnown RBP9.13□□□□□ -0.95
CCDC39-202ENST00000471307 BRF1Q92994 677 aa9.13□□□□□ -0.95
CCDC39-202ENST00000471307 FAM86C1Q9NVL1 165 aa9.13□□□□□ -0.95
CCDC39-202ENST00000471307 OR14I1A6ND48 311 aa9.12□□□□□ -0.95
CCDC39-202ENST00000471307 SEMA7AO75326 666 aa9.12□□□□□ -0.95
CCDC39-202ENST00000471307 KRT1P04264 644 aa9.12□□□□□ -0.95
CCDC39-202ENST00000471307 LAPTM5Q13571 262 aa9.12□□□□□ -0.95
CCDC39-202ENST00000471307 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
CCDC39-202ENST00000471307 PPM1BO75688 479 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 EFEMP2O95967 443 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 GSTM1P09488 218 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 ARL4AP40617 200 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 KRTAP19-4Q3LI73 84 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 NAT16Q8N8M0 369 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 KLHL6Q8WZ60 621 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 TOX2Q96NM4 488 aa9.11□□□□□ -0.95
CCDC39-202ENST00000471307 FGF10O15520 208 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-202ENST00000471307 C1QTNF9P0C862 333 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
CCDC39-202ENST00000471307 ADGRF1Q5T601 910 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 OLFML2BQ68BL8 750 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 ZNF605Q86T29 641 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 CILP2Q8IUL8 1156 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 FAM169BQ8N8A8 192 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 KCNN1Q92952 543 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 RCC1LQ96I51 464 aaKnown RBP9.1□□□□□ -0.95
CCDC39-202ENST00000471307 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 MCOLN1Q9GZU1 580 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 ACSL6Q9UKU0 697 aa9.1□□□□□ -0.95
CCDC39-202ENST00000471307 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-202ENST00000471307 TEX51A0A1B0GUA7 166 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 ABLIM1O14639 778 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 EPHX1P07099 455 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 ZNF143P52747 638 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-202ENST00000471307 ERVFRD-1P60508 538 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 TMEM52Q8NDY8 209 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
CCDC39-202ENST00000471307 CD320Q9NPF0 282 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 PCDHB10Q9UN67 800 aa9.09□□□□□ -0.95
CCDC39-202ENST00000471307 TCAF2A6NFQ2 919 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 ETV2O00321 342 aaPredicted RBP9.08□□□□□ -0.96
CCDC39-202ENST00000471307 NAT2P11245 290 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 RBM10P98175 930 aaKnown RBP9.08□□□□□ -0.96
CCDC39-202ENST00000471307 GRB10Q13322 594 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 TNNI3KQ59H18 835 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 RCSD1Q6JBY9 416 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 VHLLQ6RSH7 139 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 ATG14Q6ZNE5 492 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 ADAT2Q7Z6V5 191 aaKnown RBP9.08□□□□□ -0.96
CCDC39-202ENST00000471307 SIRT2Q8IXJ6 389 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
CCDC39-202ENST00000471307 MYOCOSA0A1B0GUC4 107 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 ANKRD34BA5PLL1 514 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 CD3EP07766 207 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 PRKCAP17252 672 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 GALK1P51570 392 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 CORO7P57737 925 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 TMEM62Q0P6H9 643 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 NCAPHQ15003 741 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 EEF1DP3Q658K8 133 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 ARHGEF39Q8N4T4 335 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 ZSCAN18Q8TBC5 510 aaPredicted RBP9.07□□□□□ -0.96
CCDC39-202ENST00000471307 ZDHHC15Q96MV8 337 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 KCNK12Q9HB15 430 aa9.07□□□□□ -0.96
CCDC39-202ENST00000471307 MPOP05164 745 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC39-202ENST00000471307 YBX1P67809 324 aaKnown RBP9.06□□□□□ -0.96
CCDC39-202ENST00000471307 CYP4F8P98187 520 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 KCNA10Q16322 511 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 TMEM132EQ6IEE7 984 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 KIAA1211LQ6NV74 962 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 NUP43Q8NFH3 380 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 PTCHD1Q96NR3 888 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 JMJD8Q96S16 334 aa9.06□□□□□ -0.96
CCDC39-202ENST00000471307 CGGBP1Q9UFW8 167 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-202ENST00000471307 IFNGR1P15260 489 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 PPP2R5DQ14738 602 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 JAMLQ86YT9 394 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 CRACR2BQ8N4Y2 399 aaPredicted RBP9.05□□□□□ -0.96
CCDC39-202ENST00000471307 ADCY4Q8NFM4 1077 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 FGD4Q96M96 766 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 IMPACTQ9P2X3 320 aa9.05□□□□□ -0.96
CCDC39-202ENST00000471307 SUSD2Q9UGT4 822 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms