RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LRRC41Q15345 812 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 CCDC178Q5BJE1 867 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 RRP12Q5JTH9 1297 aaKnown RBP15.9■□□□□ 0.14
HMGN1-211ENST00000471260 C1orf53Q5VUE5 145 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 CWC27Q6UX04 472 aaKnown RBP15.9■□□□□ 0.14
HMGN1-211ENST00000471260 BTNL9Q6UXG8 535 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 RNF180Q86T96 592 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 ESR2Q92731 530 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 TMEM47Q9BQJ4 181 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 DSCC1Q9BVC3 393 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 XPNPEP3Q9NQH7 507 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 PRR12Q9ULL5 1215 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 ZMYND8Q9ULU4 1186 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-211ENST00000471260 ZNF536O15090 1300 aa15.9■□□□□ 0.14
HMGN1-211ENST00000471260 HAND2P61296 217 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 ANO1Q5XXA6 986 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 CTNNA3Q9UI47 895 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 PNMA2Q9UL42 364 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 FAM184BQ9ULE4 1060 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 SMCHD1A6NHR9 2005 aa15.89■□□□□ 0.13
HMGN1-211ENST00000471260 RANBP2P49792 3224 aaKnown RBP15.88■□□□□ 0.13
HMGN1-211ENST00000471260 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-211ENST00000471260 SYN1P17600 705 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 SNX17Q15036 470 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 SLC39A5Q6ZMH5 540 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 DGKHQ86XP1 1220 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 AGBL1Q96MI9 1066 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 RNF146Q9NTX7 359 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 PHF24Q9UPV7 400 aa15.88■□□□□ 0.13
HMGN1-211ENST00000471260 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 ICAM1P05362 532 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 TAL1P17542 331 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 MAGEA10P43363 369 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 IQCA1Q86XH1 822 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 TBC1D10CQ8IV04 446 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 FAM133AQ8N9E0 248 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 TSEN34Q9BSV6 310 aaKnown RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 RANBP17Q9H2T7 1088 aaKnown RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 A1CFQ9NQ94 594 aaKnown RBP15.87■□□□□ 0.13
HMGN1-211ENST00000471260 HOMER2Q9NSB8 354 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 PRKAG2Q9UGJ0 569 aa15.87■□□□□ 0.13
HMGN1-211ENST00000471260 ASB14A6NK59 587 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 DUSP11O75319 330 aaKnown RBP15.86■□□□□ 0.13
HMGN1-211ENST00000471260 SNHG28P0DPA3 235 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 PDHBP11177 359 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 ALAS1P13196 640 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 ADCYAP1R1P41586 468 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 RTP1P59025 263 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 GPATCH4Q5T3I0 446 aaKnown RBP15.86■□□□□ 0.13
HMGN1-211ENST00000471260 TTC22Q5TAA0 569 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 FGD4Q96M96 766 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.86■□□□□ 0.13
HMGN1-211ENST00000471260 CCPG1Q9ULG6 757 aa15.86■□□□□ 0.13
HMGN1-211ENST00000471260 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 ADAMTS4O75173 837 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 PGK1P00558 417 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-211ENST00000471260 PDE4AP27815 886 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 SYDE2Q5VT97 1194 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 RUFY2Q8WXA3 655 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 ANKS1AQ92625 1134 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 LBHD1Q9BQE6 289 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-211ENST00000471260 CNNM2Q9H8M5 875 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 SPC25Q9HBM1 224 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-211ENST00000471260 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 RAD50Q92878 1312 aa15.85■□□□□ 0.13
HMGN1-211ENST00000471260 LOC102724159A0A0B4J2E5 919 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 CST5P28325 142 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-211ENST00000471260 CNTN2Q02246 1040 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 PWP2Q15269 919 aaKnown RBP15.84■□□□□ 0.13
HMGN1-211ENST00000471260 LRIT3Q3SXY7 679 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 TTBK2Q6IQ55 1244 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 GPR153Q6NV75 609 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 TDHQ8IZJ6 230 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 KLHDC9Q8NEP7 349 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 KRT23Q9C075 422 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 UBE2OQ9C0C9 1292 aaKnown RBP15.84■□□□□ 0.13
HMGN1-211ENST00000471260 MAF1Q9H063 256 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 CYP39A1Q9NYL5 469 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 ATP11BQ9Y2G3 1177 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 NEDD4P46934 1319 aa15.84■□□□□ 0.13
HMGN1-211ENST00000471260 KDM4AO75164 1064 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 GSPT1P15170 499 aaKnown RBP15.83■□□□□ 0.12
HMGN1-211ENST00000471260 SLC16A2P36021 539 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 CCDC144BQ3MJ40 725 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms