RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTPRE-207ENST00000471218 FAM47AQ5JRC9 791 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 GPATCH4Q5T3I0 446 aaKnown RBP10.56□□□□□ -0.72
PTPRE-207ENST00000471218 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
PTPRE-207ENST00000471218 SLC17A8Q8NDX2 589 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 MKL1Q969V6 931 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 DYNLL2Q96FJ2 89 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
PTPRE-207ENST00000471218 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 AS3MTQ9HBK9 375 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 NYAP2Q9P242 653 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 MYH1P12882 1939 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
PTPRE-207ENST00000471218 INHAP05111 366 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 U2AF2P26368 475 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRE-207ENST00000471218 CALML3P27482 149 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 CTGFP29279 349 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 BMP8BP34820 402 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 UBE2HP62256 183 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 DDX11Q96FC9 970 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 DEFB118Q96PH6 123 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 FOXP1Q9H334 677 aaPredicted RBP10.55□□□□□ -0.72
PTPRE-207ENST00000471218 PRO3102Q9H379 93 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 PAK6Q9NQU5 681 aaPredicted RBP10.55□□□□□ -0.72
PTPRE-207ENST00000471218 LMBRD1Q9NUN5 540 aa10.55□□□□□ -0.72
PTPRE-207ENST00000471218 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 A0A0C4DFX4 3053 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 TRIM75PA6NK02 468 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 TRAK2O60296 914 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 YEATS4O95619 227 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 HMGCRP04035 888 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 CERKLQ49MI3 558 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 ZNF280CQ8ND82 737 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 CCDC12Q8WUD4 166 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 NUP133Q8WUM0 1156 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 SLC26A6Q9BXS9 759 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 SH2D4AQ9H788 454 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 BRMS1Q9HCU9 246 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 HMX1Q9NP08 348 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-207ENST00000471218 POLR3EQ9NVU0 708 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 GABRQQ9UN88 632 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 RPTORQ8N122 1335 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
PTPRE-207ENST00000471218 DDTLA6NHG4 134 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-207ENST00000471218 SMIM22K7EJ46 135 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-207ENST00000471218 BMP15O95972 392 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 MMP1P03956 469 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 PARP1P09874 1014 aaKnown RBP10.53□□□□□ -0.72
PTPRE-207ENST00000471218 TRAF1Q13077 416 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 NBR1Q14596 966 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 PFKFB3Q16875 520 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-207ENST00000471218 SH3BP5LQ7L8J4 393 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
PTPRE-207ENST00000471218 ANKRD13CQ8N6S4 541 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 GLT8D2Q9H1C3 349 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 CABP5Q9NP86 173 aa10.53□□□□□ -0.72
PTPRE-207ENST00000471218 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 C19orf81C9J6K1 198 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 NMT2O60551 498 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 ASNSP08243 561 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 SCG2P13521 617 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 AKR1B1P15121 316 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 ELNP15502 786 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 TRAPPC10P48553 1259 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-207ENST00000471218 EVX2Q03828 476 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 ABCB5Q2M3G0 1257 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 KRT40Q6A162 431 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 DAGLBQ8NCG7 672 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 GMCL1Q96IK5 515 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
PTPRE-207ENST00000471218 MYL10Q9BUA6 226 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPRE-207ENST00000471218 RTEL1Q9NZ71 1219 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 TMOD4Q9NZQ9 345 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
PTPRE-207ENST00000471218 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
PTPRE-207ENST00000471218 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms