RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 RTEL1Q9NZ71 1219 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 TMOD4Q9NZQ9 345 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 RCOR1Q9UKL0 485 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 RLFQ13129 1914 aa17.37■□□□□ 0.37
COL4A5-203ENST00000470339 LOC285556D6RIA3 1793 aa17.36■□□□□ 0.37
COL4A5-203ENST00000470339 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
COL4A5-203ENST00000470339 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
COL4A5-203ENST00000470339 PRPF40AO75400 957 aaKnown RBP17.36■□□□□ 0.37
COL4A5-203ENST00000470339 NR5A1Q13285 461 aa17.36■□□□□ 0.37
COL4A5-203ENST00000470339 FBXO11Q86XK2 927 aa17.36■□□□□ 0.37
COL4A5-203ENST00000470339 SLF1Q9BQI6 1058 aa17.36■□□□□ 0.37
COL4A5-203ENST00000470339 TFIP11Q9UBB9 837 aaKnown RBP17.36■□□□□ 0.37
COL4A5-203ENST00000470339 TRAF5O00463 557 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 YEATS4O95619 227 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 TRAPPC10P48553 1259 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
COL4A5-203ENST00000470339 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
COL4A5-203ENST00000470339 PPIL2Q13356 520 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 MCTP2Q6DN12 878 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
COL4A5-203ENST00000470339 COA7Q96BR5 231 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
COL4A5-203ENST00000470339 RIC8AQ9NPQ8 531 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
COL4A5-203ENST00000470339 FIBPO43427 364 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 ADCY7P51828 1080 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 HMGCS2P54868 508 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 MYPNQ86TC9 1320 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 KIFC2Q96AC6 838 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 USP28Q96RU2 1077 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 ELP3Q9H9T3 547 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 PPP1R9AQ9ULJ8 1098 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
COL4A5-203ENST00000470339 KCNH4Q9UQ05 1017 aa17.34■□□□□ 0.37
COL4A5-203ENST00000470339 MORC2Q9Y6X9 1032 aaPredicted RBP17.34■□□□□ 0.37
COL4A5-203ENST00000470339 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
COL4A5-203ENST00000470339 A0A0G2JLL6 359 aaPredicted RBP17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L15C9J2P7 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L11C9JVI0 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L18D6R9N7 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L22D6RA61 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L19D6RCP7 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L20D6RJB6 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
COL4A5-203ENST00000470339 USP17L24Q0WX57 530 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 KRT25Q7Z3Z0 450 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 PRRT2Q7Z6L0 340 aaPredicted RBP17.33■□□□□ 0.36
COL4A5-203ENST00000470339 C2orf69Q8N8R5 385 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
COL4A5-203ENST00000470339 CUL5Q93034 780 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 PSTPIP2Q9H939 334 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.36
COL4A5-203ENST00000470339 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 PCDHA6Q9UN73 950 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 PCDHA8Q9Y5H6 950 aa17.33■□□□□ 0.36
COL4A5-203ENST00000470339 CCDC194A0A1B0GVG4 234 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 FLOT1O75955 427 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 TOB1P50616 345 aaPredicted RBP17.32■□□□□ 0.36
COL4A5-203ENST00000470339 UBE2HP62256 183 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 COG2Q14746 738 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 CATSPERGQ6ZRH7 1159 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
COL4A5-203ENST00000470339 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 ADAMTS5Q9UNA0 930 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
COL4A5-203ENST00000470339 COL11A1P12107 1806 aaPredicted RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 ABCB11O95342 1321 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 IRF6O14896 467 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 TRAK2O60296 914 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 ZBED4O75132 1171 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 BMP15O95972 392 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 MBD3O95983 291 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 ICAM1P05362 532 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 CLK2P49760 499 aaKnown RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 NBR1Q14596 966 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 SLC39A14Q15043 492 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 OPTNQ96CV9 577 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
COL4A5-203ENST00000470339 CLIC4Q9Y696 253 aa17.31■□□□□ 0.36
COL4A5-203ENST00000470339 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
COL4A5-203ENST00000470339 DSG3P32926 999 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms