RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
USP30-205ENST00000470117 SMCHD1A6NHR9 2005 aa11.09□□□□□ -0.63
USP30-205ENST00000470117 RANBP2P49792 3224 aaKnown RBP11.09□□□□□ -0.63
USP30-205ENST00000470117 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
USP30-205ENST00000470117 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
USP30-205ENST00000470117 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 SNAI1O95863 264 aaPredicted RBP11.08□□□□□ -0.64
USP30-205ENST00000470117 ALAS1P13196 640 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 TLE2Q04725 743 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
USP30-205ENST00000470117 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 ARMCX2Q7L311 632 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
USP30-205ENST00000470117 STAG1Q8WVM7 1258 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 STARD7Q9NQZ5 370 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 MCM3APO60318 1980 aa11.08□□□□□ -0.64
USP30-205ENST00000470117 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 ORC4O43929 436 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 CLTBP09497 229 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 C6orf222P0C671 652 aaPredicted RBP11.07□□□□□ -0.64
USP30-205ENST00000470117 ACLYP53396 1101 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 SNAP25P60880 206 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 ACVR2BQ13705 512 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
USP30-205ENST00000470117 SH3RF1Q7Z6J0 888 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 BADQ92934 168 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 FGD4Q96M96 766 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 ABHD16BQ9H3Z7 469 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 SPC25Q9HBM1 224 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
USP30-205ENST00000470117 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 PRR12Q9ULL5 1215 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 CCDC171Q6TFL3 1326 aa11.07□□□□□ -0.64
USP30-205ENST00000470117 TRIM43BA6NCK2 446 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 MYADML2A6NDP7 307 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
USP30-205ENST00000470117 RAG1P15918 1043 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 HAND2P61296 217 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 AAMPQ13685 434 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 ALX1Q15699 326 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 TKFCQ3LXA3 575 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
USP30-205ENST00000470117 CCDC144CPQ8IYA2 1237 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 DCAF4Q8WV16 495 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 TRIM43Q96BQ3 446 aaPredicted RBP11.06□□□□□ -0.64
USP30-205ENST00000470117 GLT1D1Q96MS3 346 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 TSEN34Q9BSV6 310 aaKnown RBP11.06□□□□□ -0.64
USP30-205ENST00000470117 RWDD1Q9H446 243 aaPredicted RBP11.06□□□□□ -0.64
USP30-205ENST00000470117 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 ZNF536O15090 1300 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 ZMYM6O95789 1325 aa11.06□□□□□ -0.64
USP30-205ENST00000470117 DCDC2CA8MYV0 355 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 ADCY6O43306 1168 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 PLA2G6O60733 806 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 FGAP02671 866 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
USP30-205ENST00000470117 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
USP30-205ENST00000470117 SHHQ15465 462 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 KCNA10Q16322 511 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 C9orf50Q5SZB4 431 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
USP30-205ENST00000470117 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 TMEM39AQ9NV64 488 aa11.05□□□□□ -0.64
USP30-205ENST00000470117 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
USP30-205ENST00000470117 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 ASB14A6NK59 587 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 CST5P28325 142 aaPredicted RBP11.04□□□□□ -0.64
USP30-205ENST00000470117 SLC16A2P36021 539 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
USP30-205ENST00000470117 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
USP30-205ENST00000470117 MUM1L1Q5H9M0 696 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 TBC1D10CQ8IV04 446 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 PCSK9Q8NBP7 692 aaKnown RBP11.04□□□□□ -0.64
USP30-205ENST00000470117 KLHDC9Q8NEP7 349 aa11.04□□□□□ -0.64
USP30-205ENST00000470117 RNPC3Q96LT9 517 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms