RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 COL6A1P12109 1028 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 PRAMEF19Q5SWL8 479 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 MAMDC4Q6UXC1 1216 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 RASGRP2Q7LDG7 609 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 AGBL1Q96MI9 1066 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 ZSCAN10Q96SZ4 725 aaPredicted RBP31.3■■■□□ 2.6
SNX5-206ENST00000469704 ZKSCAN3Q9BRR0 538 aa31.3■■■□□ 2.6
SNX5-206ENST00000469704 SMCHD1A6NHR9 2005 aa31.29■■■□□ 2.6
SNX5-206ENST00000469704 TTBK2Q6IQ55 1244 aa31.29■■■□□ 2.6
SNX5-206ENST00000469704 ARRDC4Q8NCT1 418 aa31.29■■■□□ 2.6
SNX5-206ENST00000469704 RANBP17Q9H2T7 1088 aaKnown RBP31.29■■■□□ 2.6
SNX5-206ENST00000469704 U3KPZ7 1027 aaPredicted RBP31.29■■■□□ 2.6
SNX5-206ENST00000469704 SYNGAP1Q96PV0 1343 aa31.28■■■□□ 2.6
SNX5-206ENST00000469704 ZNF543Q08ER8 600 aa31.28■■■□□ 2.6
SNX5-206ENST00000469704 SYDE2Q5VT97 1194 aa31.28■■■□□ 2.6
SNX5-206ENST00000469704 TRERF1Q96PN7 1200 aa31.28■■■□□ 2.6
SNX5-206ENST00000469704 ICAM1P05362 532 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 PTH1RQ03431 593 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 GPATCH4Q5T3I0 446 aaKnown RBP31.27■■■□□ 2.6
SNX5-206ENST00000469704 GPCPD1Q9NPB8 672 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 HOMER2Q9NSB8 354 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 RNF146Q9NTX7 359 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 PNMA2Q9UL42 364 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 CNPY2Q9Y2B0 182 aa31.27■■■□□ 2.6
SNX5-206ENST00000469704 DNM1LO00429 736 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 ALAS1P13196 640 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 SLC16A2P36021 539 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 CCDC174Q6PII3 467 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 PNMA1Q8ND90 353 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 KAT14Q9H8E8 782 aa31.26■■■□□ 2.59
SNX5-206ENST00000469704 PFASO15067 1338 aa31.25■■■□□ 2.59
SNX5-206ENST00000469704 FRMPD2Q68DX3 1309 aaPredicted RBP31.25■■■□□ 2.59
SNX5-206ENST00000469704 TRDNQ13061 729 aa31.25■■■□□ 2.59
SNX5-206ENST00000469704 MAP4K1Q92918 833 aa31.25■■■□□ 2.59
SNX5-206ENST00000469704 ALPK3Q96L96 1907 aa31.25■■■□□ 2.59
SNX5-206ENST00000469704 CYP21A2P08686 494 aa31.24■■■□□ 2.59
SNX5-206ENST00000469704 ZNF865P0CJ78 1059 aaPredicted RBP31.24■■■□□ 2.59
SNX5-206ENST00000469704 SNAP25P60880 206 aa31.24■■■□□ 2.59
SNX5-206ENST00000469704 ENAHQ8N8S7 591 aaPredicted RBP31.24■■■□□ 2.59
SNX5-206ENST00000469704 UBAC1Q9BSL1 405 aa31.24■■■□□ 2.59
SNX5-206ENST00000469704 A1CFQ9NQ94 594 aaKnown RBP31.24■■■□□ 2.59
SNX5-206ENST00000469704 CCPG1Q9ULG6 757 aa31.24■■■□□ 2.59
SNX5-206ENST00000469704 TNKSO95271 1327 aa31.24■■■□□ 2.59
SNX5-206ENST00000469704 POTEB2H3BUK9 544 aa31.23■■■□□ 2.59
SNX5-206ENST00000469704 FAM133AQ8N9E0 248 aa31.23■■■□□ 2.59
SNX5-206ENST00000469704 SNAI1O95863 264 aaPredicted RBP31.22■■■□□ 2.59
SNX5-206ENST00000469704 RARBP10826 455 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 AKR1A1P14550 325 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 TAL1P17542 331 aaPredicted RBP31.21■■■□□ 2.59
SNX5-206ENST00000469704 BMP2KLQ5H9B9 411 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 ANO1Q5XXA6 986 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 FGD4Q96M96 766 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 ABHD16BQ9H3Z7 469 aa31.21■■■□□ 2.59
SNX5-206ENST00000469704 KIAA1211Q6ZU35 1233 aa31.2■■■□□ 2.59
SNX5-206ENST00000469704 SENP6Q9GZR1 1112 aaPredicted RBP31.2■■■□□ 2.59
SNX5-206ENST00000469704 FAM184BQ9ULE4 1060 aa31.2■■■□□ 2.59
SNX5-206ENST00000469704 KBTBD13C9JR72 458 aa31.19■■■□□ 2.58
SNX5-206ENST00000469704 CNTN2Q02246 1040 aa31.19■■■□□ 2.58
SNX5-206ENST00000469704 MUM1L1Q5H9M0 696 aa31.19■■■□□ 2.58
SNX5-206ENST00000469704 GJC2Q5T442 439 aaPredicted RBP31.19■■■□□ 2.58
SNX5-206ENST00000469704 IFIT1BQ5T764 474 aaKnown RBP31.19■■■□□ 2.58
SNX5-206ENST00000469704 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.19■■■□□ 2.58
SNX5-206ENST00000469704 CYP39A1Q9NYL5 469 aa31.19■■■□□ 2.58
SNX5-206ENST00000469704 ASB14A6NK59 587 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 ACVR2BQ13705 512 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 SEC23AQ15436 765 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 ASPRV1Q53RT3 343 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 HABP4Q5JVS0 413 aaKnown RBP31.18■■■□□ 2.58
SNX5-206ENST00000469704 XPNPEP3Q9NQH7 507 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 COLQQ9Y215 455 aaPredicted RBP31.18■■■□□ 2.58
SNX5-206ENST00000469704 WDR19Q8NEZ3 1342 aa31.18■■■□□ 2.58
SNX5-206ENST00000469704 E7EWF7 191 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 GOLGA8HP0CJ92 632 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 LRRC41Q15345 812 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 CYB5R4Q7L1T6 521 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 ARMCX2Q7L311 632 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 CCDC144CPQ8IYA2 1237 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 NCOA7Q8NI08 942 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 MCM3APO60318 1980 aa31.17■■■□□ 2.58
SNX5-206ENST00000469704 RNF180Q86T96 592 aa31.16■■■□□ 2.58
SNX5-206ENST00000469704 C7orf61Q8IZ16 206 aa31.16■■■□□ 2.58
SNX5-206ENST00000469704 ESYT1Q9BSJ8 1104 aa31.16■■■□□ 2.58
SNX5-206ENST00000469704 RBM8AQ9Y5S9 174 aaKnown RBP31.16■■■□□ 2.58
SNX5-206ENST00000469704 SOWAHBA6NEL2 793 aa31.15■■■□□ 2.58
SNX5-206ENST00000469704 PARP1P09874 1014 aaKnown RBP31.15■■■□□ 2.58
SNX5-206ENST00000469704 LRRC26Q2I0M4 334 aa31.15■■■□□ 2.58
SNX5-206ENST00000469704 RALYLQ86SE5 291 aaKnown RBP31.15■■■□□ 2.58
SNX5-206ENST00000469704 UBA5Q9GZZ9 404 aa31.15■■■□□ 2.58
SNX5-206ENST00000469704 CHRDL2Q6WN34 429 aa31.14■■■□□ 2.58
SNX5-206ENST00000469704 NSMFQ6X4W1 530 aa31.14■■■□□ 2.58
SNX5-206ENST00000469704 CCDC136Q96JN2 1154 aa31.14■■■□□ 2.58
SNX5-206ENST00000469704 MAF1Q9H063 256 aa31.14■■■□□ 2.58
SNX5-206ENST00000469704 ZHX1Q9UKY1 873 aaPredicted RBP31.14■■■□□ 2.58
SNX5-206ENST00000469704 LOC102724159A0A0B4J2E5 919 aa31.13■■■□□ 2.57
SNX5-206ENST00000469704 ERICH2A1L162 156 aa31.13■■■□□ 2.57
SNX5-206ENST00000469704 DUSP11O75319 330 aaKnown RBP31.13■■■□□ 2.57
SNX5-206ENST00000469704 PWP2Q15269 919 aaKnown RBP31.13■■■□□ 2.57
SNX5-206ENST00000469704 LSG1Q9H089 658 aaKnown RBP31.13■■■□□ 2.57
SNX5-206ENST00000469704 DNAH12Q6ZR08 3092 aa31.12■■■□□ 2.57
SNX5-206ENST00000469704 SART3Q15020 963 aaKnown RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms