RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 TKFCQ3LXA3 575 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 TTBK2Q6IQ55 1244 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 DGKHQ86XP1 1220 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 MSL3Q8N5Y2 521 aaKnown RBP21.49■■□□□ 1.03
PHGDH-204ENST00000469443 KRT23Q9C075 422 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 ACAD9Q9H845 621 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 HOMER2Q9NSB8 354 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 RNF146Q9NTX7 359 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 FRMPD2Q68DX3 1309 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-204ENST00000469443 LCTP09848 1927 aa21.49■■□□□ 1.03
PHGDH-204ENST00000469443 SNAP25P60880 206 aa21.48■■□□□ 1.03
PHGDH-204ENST00000469443 CCDC174Q6PII3 467 aa21.48■■□□□ 1.03
PHGDH-204ENST00000469443 ZNF467Q7Z7K2 595 aaPredicted RBP21.48■■□□□ 1.03
PHGDH-204ENST00000469443 CNNM2Q9H8M5 875 aa21.48■■□□□ 1.03
PHGDH-204ENST00000469443 GPCPD1Q9NPB8 672 aa21.48■■□□□ 1.03
PHGDH-204ENST00000469443 SNHG28P0DPA3 235 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 ALAS1P13196 640 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 SLC16A2P36021 539 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 SYDE2Q5VT97 1194 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 ANO1Q5XXA6 986 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 MAMDC4Q6UXC1 1216 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 TRERF1Q96PN7 1200 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 RANBP17Q9H2T7 1088 aaKnown RBP21.47■■□□□ 1.03
PHGDH-204ENST00000469443 ZSWIM5Q9P217 1185 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 SYNGAP1Q96PV0 1343 aa21.47■■□□□ 1.03
PHGDH-204ENST00000469443 DNM1LO00429 736 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 SGSM2O43147 1006 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 PTH1RQ03431 593 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 ZNF543Q08ER8 600 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-204ENST00000469443 ARRDC4Q8NCT1 418 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 ANKS1AQ92625 1134 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 ZSCAN10Q96SZ4 725 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-204ENST00000469443 CCPG1Q9ULG6 757 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 COLQQ9Y215 455 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-204ENST00000469443 CNPY2Q9Y2B0 182 aa21.46■■□□□ 1.03
PHGDH-204ENST00000469443 DNAH12Q6ZR08 3092 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 ICAM1P05362 532 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 ZNF865P0CJ78 1059 aaPredicted RBP21.45■■□□□ 1.02
PHGDH-204ENST00000469443 TAL1P17542 331 aaPredicted RBP21.45■■□□□ 1.02
PHGDH-204ENST00000469443 HABP4Q5JVS0 413 aaKnown RBP21.45■■□□□ 1.02
PHGDH-204ENST00000469443 C7orf61Q8IZ16 206 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 PNMA1Q8ND90 353 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 FGD4Q96M96 766 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 KAT14Q9H8E8 782 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 A1CFQ9NQ94 594 aaKnown RBP21.45■■□□□ 1.02
PHGDH-204ENST00000469443 TRIOBPQ9H2D6 2365 aa21.45■■□□□ 1.02
PHGDH-204ENST00000469443 POTEB2H3BUK9 544 aa21.44■■□□□ 1.02
PHGDH-204ENST00000469443 SNAI1O95863 264 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-204ENST00000469443 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
PHGDH-204ENST00000469443 GJC2Q5T442 439 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-204ENST00000469443 CHRDL2Q6WN34 429 aa21.44■■□□□ 1.02
PHGDH-204ENST00000469443 ENAHQ8N8S7 591 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-204ENST00000469443 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
PHGDH-204ENST00000469443 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-204ENST00000469443 TNKSO95271 1327 aa21.44■■□□□ 1.02
PHGDH-204ENST00000469443 LRRC37A2A6NM11 1700 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 CYP21A2P08686 494 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 RARBP10826 455 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 AKR1A1P14550 325 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 MUM1L1Q5H9M0 696 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 UBAC1Q9BSL1 405 aa21.43■■□□□ 1.02
PHGDH-204ENST00000469443 SENP6Q9GZR1 1112 aaPredicted RBP21.43■■□□□ 1.02
PHGDH-204ENST00000469443 KBTBD13C9JR72 458 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 CNTN2Q02246 1040 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 TRDNQ13061 729 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 LRRC41Q15345 812 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 LRRC26Q2I0M4 334 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 XPNPEP3Q9NQH7 507 aa21.42■■□□□ 1.02
PHGDH-204ENST00000469443 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
PHGDH-204ENST00000469443 GOLGA8HP0CJ92 632 aa21.41■■□□□ 1.02
PHGDH-204ENST00000469443 ARMCX2Q7L311 632 aa21.41■■□□□ 1.02
PHGDH-204ENST00000469443 ABHD16BQ9H3Z7 469 aa21.41■■□□□ 1.02
PHGDH-204ENST00000469443 CYP39A1Q9NYL5 469 aa21.41■■□□□ 1.02
PHGDH-204ENST00000469443 ZHX1Q9UKY1 873 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-204ENST00000469443 PNMA2Q9UL42 364 aa21.41■■□□□ 1.02
PHGDH-204ENST00000469443 MYCNP04198 464 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-204ENST00000469443 ACVR2BQ13705 512 aa21.4■■□□□ 1.02
PHGDH-204ENST00000469443 CYB5R4Q7L1T6 521 aa21.4■■□□□ 1.02
PHGDH-204ENST00000469443 CCDC144CPQ8IYA2 1237 aa21.4■■□□□ 1.02
PHGDH-204ENST00000469443 MAP4K1Q92918 833 aa21.4■■□□□ 1.02
PHGDH-204ENST00000469443 FAM184BQ9ULE4 1060 aa21.4■■□□□ 1.02
PHGDH-204ENST00000469443 ZMYND8Q9ULU4 1186 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-204ENST00000469443 WDR19Q8NEZ3 1342 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 SOWAHBA6NEL2 793 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 ASB14A6NK59 587 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 SLC34A2O95436 690 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 SEC23AQ15436 765 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 ASPRV1Q53RT3 343 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 IFIT1BQ5T764 474 aaKnown RBP21.39■■□□□ 1.01
PHGDH-204ENST00000469443 NSMFQ6X4W1 530 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 UBA5Q9GZZ9 404 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 PRO3102Q9H379 93 aa21.39■■□□□ 1.01
PHGDH-204ENST00000469443 RANBP2P49792 3224 aaKnown RBP21.38■■□□□ 1.01
PHGDH-204ENST00000469443 PGK1P00558 417 aa21.38■■□□□ 1.01
PHGDH-204ENST00000469443 RNF180Q86T96 592 aa21.38■■□□□ 1.01
PHGDH-204ENST00000469443 LENG1Q96BZ8 264 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-204ENST00000469443 CPVLQ9H3G5 476 aa21.38■■□□□ 1.01
PHGDH-204ENST00000469443 RBM27Q9P2N5 1060 aaKnown RBP21.38■■□□□ 1.01
PHGDH-204ENST00000469443 E7EWF7 191 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms