RNA–Protein interactions for RNA: ENST00000469065.1

SEMA4A-211, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-211ENST00000469065 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 APAF1O14727 1248 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 B4GALT4O60513 344 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 STAT3P40763 770 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 TRPV6Q9H1D0 765 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 CLDND1Q9NY35 253 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 MTUS1Q9ULD2 1270 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
SEMA4A-211ENST00000469065 MED19A0JLT2 244 aaPredicted RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 NBPF7P0C2Y1 421 aaPredicted RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 IL15P40933 162 aaPredicted RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 JAG1P78504 1218 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 FSCN1Q16658 493 aaKnown RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 CXCL17Q6UXB2 119 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 MAPKAPK5Q8IW41 473 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 TSR2Q969E8 191 aaKnown RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 SEMA4AQ9H3S1 761 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 NSUN3Q9H649 340 aaKnown RBP12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 INSL6Q9Y581 213 aa12.93□□□□□ -0.34
SEMA4A-211ENST00000469065 FLT1P17948 1338 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 MYADML2A6NDP7 307 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 PPP4CP60510 307 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 SMAD4Q13485 552 aaKnown RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 ACAP1Q15027 740 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 ST3GAL2Q16842 350 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 EHD4Q9H223 541 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 ALDH8A1Q9H2A2 487 aaPredicted RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 DNAJC18Q9H819 358 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 CTDP1Q9Y5B0 961 aaPredicted RBP12.92□□□□□ -0.34
SEMA4A-211ENST00000469065 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 MCAMP43121 646 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 Q9Y3F1 56 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 TECTAO75443 2155 aa12.91□□□□□ -0.34
SEMA4A-211ENST00000469065 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 TPRP12270 2363 aaKnown RBP12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 GJB5O95377 273 aa12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
SEMA4A-211ENST00000469065 LINC01553A4QN01 128 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 MBTPS2O43462 519 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 IQCF3P0C7M6 154 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 USP5P45974 858 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 CCER1Q8TC90 406 aaPredicted RBP12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 FBXO40Q9UH90 709 aa12.89□□□□□ -0.35
SEMA4A-211ENST00000469065 IL16Q14005 1332 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 BEX3Q00994 111 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 IKBKEQ14164 716 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 TCEAL5Q5H9L2 206 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 TLK2Q86UE8 772 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 KMT2BQ9UMN6 2715 aaPredicted RBP12.88□□□□□ -0.35
SEMA4A-211ENST00000469065 TRIOO75962 3097 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 ATRXP46100 2492 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 ASB14A6NK59 587 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 VCPP55072 806 aaKnown RBP12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 COL9A2Q14055 689 aaPredicted RBP12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
SEMA4A-211ENST00000469065 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
SEMA4A-211ENST00000469065 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
SEMA4A-211ENST00000469065 H3BNC9 293 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms