RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 INCENPQ9NQS7 918 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 MYO1AQ9UBC5 1043 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 L1RE1Q9UN81 338 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3B1-207ENST00000468925 FAM169AQ9Y6X4 670 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 SHPRHQ149N8 1683 aa5.5□□□□□ -1.53
SF3B1-207ENST00000468925 ABCC4O15439 1325 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 DISP1Q96F81 1524 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 TPD52L2O43399 206 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 AHCYL1O43865 530 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 OPA1O60313 960 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 RTN2O75298 545 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 LUC7L3O95232 432 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 SDSP20132 328 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 SYT1P21579 422 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 IDH3AP50213 366 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 APBA1Q02410 837 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 PPFIA1Q13136 1202 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 GNL2Q13823 731 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 MLECQ14165 292 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 IQCB1Q15051 598 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 RTN1Q16799 776 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC57Q2TAC2 916 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 BEND6Q5SZJ8 279 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 SRGAP1Q7Z6B7 1085 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 MORC1Q86VD1 984 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 ANKMY2Q8IV38 441 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC83Q8IWF9 413 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 DMRTC2Q8IXT2 367 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 RBM12BQ8IXT5 1001 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 EXOC8Q8IYI6 725 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 ANKRD44Q8N8A2 993 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 CNNM3Q8NE01 707 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 FAM76AQ8TAV0 307 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 SMARCC1Q92922 1105 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC47Q96A33 483 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 JAKMIP1Q96N16 626 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 JPH2Q9BR39 696 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 NAA15Q9BXJ9 866 aaKnown RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 BIN2Q9UBW5 565 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-207ENST00000468925 ITGB1BP2Q9UKP3 347 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 CNPY2Q9Y2B0 182 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 MRFAP1Q9Y605 127 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 MYOM1P52179 1685 aa5.49□□□□□ -1.53
SF3B1-207ENST00000468925 TCHHQ07283 1943 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 UNC13BO14795 1591 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 MSH6P52701 1360 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 A0A0A0MRY4 1105 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GOLGA6L10A0A0M3HER8 536 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 TARSL2A2RTX5 802 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GOLGA8KD6RF30 607 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 TGFBR3LH3BV60 316 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 EXOC5O00471 708 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 MEFVO15553 781 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 FIBPO43427 364 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 SASH3O75995 380 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 FESP07332 822 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 MYBL2P10244 700 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CHMLP26374 656 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GRNP28799 593 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 HSPA4P34932 840 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GCKP35557 465 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 RPS6KA3P51812 740 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 PLAURQ03405 335 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 EXOSC9Q06265 439 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CCINQ13939 588 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 ZRSR2Q15696 482 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 SNCBQ16143 134 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 WHAMMP3Q1A5X7 153 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CEP85LQ5SZL2 805 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 E4F1Q66K89 784 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 IQCEQ6IPM2 695 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC70Q6NSX1 233 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CRELD2Q6UXH1 353 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 TSHZ1Q6ZSZ6 1077 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 HFE2Q6ZVN8 426 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 FAM35AQ86V20 835 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CCAR1Q8IX12 1150 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 TEX9Q8N6V9 391 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GBP7Q8N8V2 638 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 ZFAND2BQ8WV99 257 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 ZKSCAN4Q969J2 545 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 VTI1AQ96AJ9 217 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 RMDN2Q96LZ7 410 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 CARD6Q9BX69 1037 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 GSX2Q9BZM3 304 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 ALDH8A1Q9H2A2 487 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 KLC4Q9NSK0 619 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 SLAIN2Q9P270 581 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 KLHL42Q9P2K6 505 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 NOVA2Q9UNW9 492 aaKnown RBP5.48□□□□□ -1.53
SF3B1-207ENST00000468925 EXOC6BQ9Y2D4 811 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 NUB1Q9Y5A7 615 aa5.48□□□□□ -1.53
SF3B1-207ENST00000468925 TTC21AQ8NDW8 1320 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms