RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 USP17L11C9JVI0 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L18D6R9N7 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L22D6RA61 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L17D6RBQ6 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L19D6RCP7 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L20D6RJB6 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 KIF23Q02241 960 aaPredicted RBP20.16■□□□□ 0.82
RPL39-202ENST00000468844 USP17L24Q0WX57 530 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 FSTL1Q12841 308 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 MS4A4AQ96JQ5 239 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 TLL2Q9Y6L7 1015 aa20.16■□□□□ 0.82
RPL39-202ENST00000468844 KIF28PB7ZC32 967 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 HOXA7P31268 230 aaPredicted RBP20.15■□□□□ 0.82
RPL39-202ENST00000468844 NAPAP54920 295 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 ATG4CQ96DT6 458 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 SLC38A10Q9HBR0 1119 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 AGTPBP1Q9UPW5 1226 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 TMEM88BA6NKF7 163 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 TAL1P17542 331 aaPredicted RBP20.15■□□□□ 0.82
RPL39-202ENST00000468844 DSG3P32926 999 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 ZNF157P51786 506 aaPredicted RBP20.15■□□□□ 0.82
RPL39-202ENST00000468844 RESTQ13127 1097 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 COG2Q14746 738 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 FASTKD5Q7L8L6 764 aaKnown RBP20.15■□□□□ 0.82
RPL39-202ENST00000468844 RASAL3Q86YV0 1011 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 DIS3L2Q8IYB7 885 aaKnown RBP20.15■□□□□ 0.82
RPL39-202ENST00000468844 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 ZNF536O15090 1300 aa20.15■□□□□ 0.82
RPL39-202ENST00000468844 ADAMTS3O15072 1205 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 GTF2A2P52657 109 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 USH1GQ495M9 461 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 RGMBQ6NW40 437 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 CCDC174Q6PII3 467 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 FBXO11Q86XK2 927 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 OXER1Q8TDS5 423 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 ZMYND12Q9H0C1 365 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 ADAMTS5Q9UNA0 930 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 CEP350Q5VT06 3117 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.81
RPL39-202ENST00000468844 BTBD18B2RXH4 712 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 VWA5AO00534 786 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 NLRP5P59047 1200 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 GPAT2Q6NUI2 795 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
RPL39-202ENST00000468844 CCDC12Q8WUD4 166 aaPredicted RBP20.14■□□□□ 0.81
RPL39-202ENST00000468844 CHAMP1Q96JM3 812 aa20.14■□□□□ 0.81
RPL39-202ENST00000468844 MYPNQ86TC9 1320 aa20.13■□□□□ 0.81
RPL39-202ENST00000468844 U2AF2P26368 475 aaKnown RBP eCLIP20.13■□□□□ 0.81
RPL39-202ENST00000468844 NR5A1Q13285 461 aa20.13■□□□□ 0.81
RPL39-202ENST00000468844 FOXD4L6Q3SYB3 417 aaPredicted RBP20.13■□□□□ 0.81
RPL39-202ENST00000468844 PPP1R18Q6NYC8 613 aa20.13■□□□□ 0.81
RPL39-202ENST00000468844 FAM173BQ6P4H8 233 aa20.13■□□□□ 0.81
RPL39-202ENST00000468844 FOXD4L3Q6VB84 417 aaPredicted RBP20.13■□□□□ 0.81
RPL39-202ENST00000468844 ZSCAN16Q9H4T2 348 aaPredicted RBP20.13■□□□□ 0.81
RPL39-202ENST00000468844 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
RPL39-202ENST00000468844 ZNFX1Q9P2E3 1918 aaKnown RBP20.13■□□□□ 0.81
RPL39-202ENST00000468844 CCL15-CCL14A0A0B4J2E2 113 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 SMCO2A6NFE2 343 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 CETPP11597 493 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
RPL39-202ENST00000468844 CCL15Q16663 113 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 REPS2Q8NFH8 660 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 BRI3BPQ8WY22 251 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 ESYT2A0FGR8 921 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 ICAM1P05362 532 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 FDX1P10109 184 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 CALML3P27482 149 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 DEKP35659 375 aaKnown RBP20.12■□□□□ 0.81
RPL39-202ENST00000468844 KRT2P35908 639 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 ASCC2Q9H1I8 757 aaPredicted RBP20.12■□□□□ 0.81
RPL39-202ENST00000468844 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
RPL39-202ENST00000468844 HOXC10Q9NYD6 342 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 PCDHA4Q9UN74 947 aa20.12■□□□□ 0.81
RPL39-202ENST00000468844 M0R2N6 131 aa20.11■□□□□ 0.81
RPL39-202ENST00000468844 POTEEQ6S8J3 1075 aa20.11■□□□□ 0.81
RPL39-202ENST00000468844 DAGLBQ8NCG7 672 aa20.11■□□□□ 0.81
RPL39-202ENST00000468844 AGBL1Q96MI9 1066 aa20.11■□□□□ 0.81
RPL39-202ENST00000468844 LCTP09848 1927 aa20.11■□□□□ 0.81
RPL39-202ENST00000468844 SLC10A3P09131 477 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 GNA11P29992 359 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 IRX3P78415 501 aaPredicted RBP20.1■□□□□ 0.81
RPL39-202ENST00000468844 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
RPL39-202ENST00000468844 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 CPXCR1Q8N123 301 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 P2RX7Q99572 595 aaKnown RBP20.1■□□□□ 0.81
RPL39-202ENST00000468844 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 C6orf50Q9HD87 102 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 ZNF214Q9UL59 606 aaPredicted RBP20.1■□□□□ 0.81
RPL39-202ENST00000468844 OPLAHO14841 1288 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 ZBED4O75132 1171 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 GALNT17Q6IS24 598 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 BRAPQ7Z569 592 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 HHIPL1Q96JK4 782 aa20.1■□□□□ 0.81
RPL39-202ENST00000468844 RAVER2Q9HCJ3 691 aaKnown RBP20.1■□□□□ 0.81
RPL39-202ENST00000468844 CCPG1Q9ULG6 757 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms