RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, human

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-208	ENST00000468600	SLC16A11	Q8NCK7	471 aa		6.27	□□□□□ -1.41
SSB-208	ENST00000468600	CDADC1	Q9BWV3	514 aa		6.27	□□□□□ -1.41
SSB-208	ENST00000468600	ROBO2	Q9HCK4	1378 aa		6.27	□□□□□ -1.41
SSB-208	ENST00000468600	CBX2	Q14781	532 aa	Predicted RBP	6.26	□□□□□ -1.41
SSB-208	ENST00000468600	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.26	□□□□□ -1.41
SSB-208	ENST00000468600	ERMP1	Q7Z2K6	904 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	GOLM1	Q8NBJ4	401 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	LRRC3	Q9BY71	257 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	MRS2	Q9HD23	443 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	ERVK13-1	Q9NX77	482 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	ACSL6	Q9UKU0	697 aa		6.26	□□□□□ -1.41
SSB-208	ENST00000468600	PDIA4	P13667	645 aa	Known RBP	6.25	□□□□□ -1.41
SSB-208	ENST00000468600	MAPKAPK2	P49137	400 aa		6.25	□□□□□ -1.41
SSB-208	ENST00000468600	ZNF200	P98182	395 aa	Predicted RBP	6.25	□□□□□ -1.41
SSB-208	ENST00000468600	TARBP2	Q15633	366 aa	Known RBP	6.25	□□□□□ -1.41
SSB-208	ENST00000468600	PRDM14	Q9GZV8	571 aa		6.25	□□□□□ -1.41
SSB-208	ENST00000468600	CHST7	Q9NS84	486 aa		6.25	□□□□□ -1.41
SSB-208	ENST00000468600	IMPACT	Q9P2X3	320 aa		6.25	□□□□□ -1.41
SSB-208	ENST00000468600	VTI1B	Q9UEU0	232 aa		6.25	□□□□□ -1.41
SSB-208	ENST00000468600		A0A1W2PQ27	194 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600		A0A1W2PQ64	194 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600		A0A1W2PQC6	194 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600		A0A1W2PQD8	194 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	CLEC3A	O75596	197 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	ATE1	O95260	518 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	MSL3P1	P0C860	447 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	IGFBP6	P24592	240 aa	Predicted RBP	6.24	□□□□□ -1.41
SSB-208	ENST00000468600	FAM160A1	Q05DH4	1040 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	NT5DC1	Q5TFE4	455 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	SUSD2	Q9UGT4	822 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	SRRD	Q9UH36	339 aa		6.24	□□□□□ -1.41
SSB-208	ENST00000468600	MEIS1	O00470	390 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	GREM1	O60565	184 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	BMP8B	P34820	402 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	TAGLN	Q01995	201 aa	Known RBP	6.23	□□□□□ -1.41
SSB-208	ENST00000468600	CWF19L2	Q2TBE0	894 aa	Known RBP	6.23	□□□□□ -1.41
SSB-208	ENST00000468600	LIPI	Q6XZB0	460 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	LSR	Q86X29	649 aa	Predicted RBP	6.23	□□□□□ -1.41
SSB-208	ENST00000468600	FBXO27	Q8NI29	283 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	SORCS2	Q96PQ0	1159 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	GMIP	Q9P107	970 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	FAN1	Q9Y2M0	1017 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	PMF1-BGLAP	U3KQ54	211 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	IRS2	Q9Y4H2	1338 aa		6.23	□□□□□ -1.41
SSB-208	ENST00000468600	MINDY4B	A8MYZ0	360 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	ZNF205	O95201	554 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	FBXL19	Q6PCT2	694 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	NAT16	Q8N8M0	369 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	SPATA25	Q9BR10	227 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	MKRN2	Q9H000	416 aa	Known RBP	6.22	□□□□□ -1.41
SSB-208	ENST00000468600	EHMT1	Q9H9B1	1298 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	KBTBD4	Q9NVX7	518 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600	MINPP1	Q9UNW1	487 aa		6.22	□□□□□ -1.41
SSB-208	ENST00000468600		A0A1W2PQJ5	194 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	TLR3	O15455	904 aa	Known RBP	6.21	□□□□□ -1.42
SSB-208	ENST00000468600	POLR2B	P30876	1174 aa	Known RBP	6.21	□□□□□ -1.42
SSB-208	ENST00000468600	MAGEA10	P43363	369 aa	Predicted RBP	6.21	□□□□□ -1.42
SSB-208	ENST00000468600	VWA3B	Q502W6	1294 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	CDCP2	Q5VXM1	449 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	OVOS1	Q6IE37	1185 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	FERMT3	Q86UX7	667 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	FNIP1	Q8TF40	1166 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.21	□□□□□ -1.42
SSB-208	ENST00000468600	JMJD8	Q96S16	334 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	AP5S1	Q9NUS5	200 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	GFOD1	Q9NXC2	390 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	FBXL21	Q9UKT6	434 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.21	□□□□□ -1.42
SSB-208	ENST00000468600	PCDHB12	Q9Y5F1	795 aa		6.21	□□□□□ -1.42
SSB-208	ENST00000468600	FSHB	P01225	129 aa		6.2	□□□□□ -1.42
SSB-208	ENST00000468600	EIF4A3	P38919	411 aa	Known RBP	6.2	□□□□□ -1.42
SSB-208	ENST00000468600	CCNF	P41002	786 aa		6.2	□□□□□ -1.42
SSB-208	ENST00000468600	ADAM17	P78536	824 aa		6.2	□□□□□ -1.42
SSB-208	ENST00000468600	JAML	Q86YT9	394 aa		6.2	□□□□□ -1.42
SSB-208	ENST00000468600	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.2	□□□□□ -1.42
SSB-208	ENST00000468600	PCDHB14	Q9Y5E9	798 aa		6.2	□□□□□ -1.42
SSB-208	ENST00000468600		A0A1B0GTL3	188 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	SRGAP3	O43295	1099 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	CYBB	P04839	570 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	FOXO4	P98177	505 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	CCDC27	Q2M243	656 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	HLA-DQA1	Q5Y7H0	255 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	PAQR3	Q6TCH7	311 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	CRTC3	Q6UUV7	619 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	ADGRG2	Q8IZP9	1017 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	REXO1	Q8N1G1	1221 aa	Known RBP	6.19	□□□□□ -1.42
SSB-208	ENST00000468600	MENT	Q9BUN1	341 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	KRTAP3-1	Q9BYR8	98 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	CNNM2	Q9H8M5	875 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	BRMS1	Q9HCU9	246 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	COPRS	Q9NQ92	184 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	SMPD4	Q9NXE4	827 aa		6.19	□□□□□ -1.42
SSB-208	ENST00000468600	PLA2G1B	P04054	148 aa	Known RBP	6.18	□□□□□ -1.42
SSB-208	ENST00000468600	GSN	P06396	782 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	DBH	P09172	617 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	VAV1	P15498	845 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	CNR2	P34972	360 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	CTSK	P43235	329 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	GJA9	P57773	515 aa		6.18	□□□□□ -1.42
SSB-208	ENST00000468600	MVK	Q03426	396 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms