RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 H7C1D1 291 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 WWC2Q6AWC2 1192 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 RASGRP4Q8TDF6 673 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 MYH8P13535 1937 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 POTEB2H3BUK9 544 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 TFRCP02786 760 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
TSPAN4-211ENST00000468468 TRIM49BA6NDI0 452 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 SLC20A2Q08357 652 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 CHP1Q99653 195 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 DISC1Q9NRI5 854 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 MCM9Q9NXL9 1143 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 CALCOCO1Q9P1Z2 691 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 PCDHA4Q9UN74 947 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 ST5P78524 1137 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 MSANTD4Q8NCY6 345 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 RASSF8Q8NHQ8 419 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 PNKPQ96T60 521 aa17.75■□□□□ 0.43
TSPAN4-211ENST00000468468 TULP2O00295 520 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 USP17L8P0C7I0 530 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 ADRA2BP18089 450 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 TFAP4Q01664 338 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 DTHD1Q6ZMT9 781 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 IRF2BP1Q8IU81 584 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 ADSSL1Q8N142 457 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 HNRNPLLQ8WVV9 542 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 SH3GLB2Q9NR46 395 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 MYO1AQ9UBC5 1043 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 MAP2K7O14733 419 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 TUBB4BP68371 445 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 RAB21Q9UL25 225 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 PDS5AQ29RF7 1337 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 PP2D1A8MPX8 630 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 PES1O00541 588 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 SERPINB2P05120 415 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 WHAMMP3Q1A5X7 153 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 RHOXF2Q9BQY4 288 aa17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 EPN1Q9Y6I3 576 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-211ENST00000468468 CTAGE15A4D2H0 777 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 CTAGE8P0CG41 777 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 NAALADL2Q58DX5 795 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 CTAGE6Q86UF2 777 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 CTAGE4Q8IX94 777 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 NEK11Q8NG66 645 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 RPGRQ92834 1020 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 PLIN2Q99541 437 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 NDUFA10O95299 355 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 USP5P45974 858 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 PMS1P54277 932 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 TYW1BQ6NUM6 668 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 GUCA1BQ9UMX6 200 aa17.73■□□□□ 0.43
TSPAN4-211ENST00000468468 H3BQF6 201 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 ERLIN1O75477 346 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 MCM6Q14566 821 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 GRIK5Q16478 980 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 MYO6Q9UM54 1294 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 UBA7P41226 1012 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 GYS2P54840 703 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 HNRNPH2P55795 449 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 GPS2Q13227 327 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 HDXQ7Z353 690 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 PCDHA6Q9UN73 950 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 LUC7L2Q9Y383 392 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 LAMB1P07942 1786 aa17.72■□□□□ 0.43
TSPAN4-211ENST00000468468 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 LGALS16A8MUM7 142 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 M0R2N6 131 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 GPSM2P81274 684 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 STIM1Q13586 685 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 KCNB1Q14721 858 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 INF2Q27J81 1249 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 TRIM47Q96LD4 638 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 TRIM10Q9UDY6 481 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 MTMR7Q9Y216 660 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 LEMD3Q9Y2U8 911 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 KLRC4O43908 158 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 TXLNBQ8N3L3 684 aa17.71■□□□□ 0.43
TSPAN4-211ENST00000468468 EEF1GP26641 437 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 DDR1Q08345 913 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms