RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TACC3Q9Y6A5 838 aa24.98■■□□□ 1.59
COL9A3-207ENST00000467819 MYADML2A6NDP7 307 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 POTEB2H3BUK9 544 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 NMT2O60551 498 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 FDX1P10109 184 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 IRX5P78411 483 aaPredicted RBP24.97■■□□□ 1.59
COL9A3-207ENST00000467819 KCTD1Q719H9 257 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 ARMCX2Q7L311 632 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 RASGRP2Q7LDG7 609 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 KLHDC9Q8NEP7 349 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 STAG1Q8WVM7 1258 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 EVI5LQ96CN4 794 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 AGBL1Q96MI9 1066 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 ACAD9Q9H845 621 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 STARD7Q9NQZ5 370 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 MTMR7Q9Y216 660 aa24.97■■□□□ 1.59
COL9A3-207ENST00000467819 LRRC37A2A6NM11 1700 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 ADCY6O43306 1168 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 DUSP11O75319 330 aaKnown RBP24.96■■□□□ 1.59
COL9A3-207ENST00000467819 ITGB8P26012 769 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 CNTN2Q02246 1040 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 KCNA10Q16322 511 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 PPP4R3BQ5MIZ7 849 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 NUP133Q8WUM0 1156 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 ABHD16BQ9H3Z7 469 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 IL17RBQ9NRM6 502 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 RNF146Q9NTX7 359 aa24.96■■□□□ 1.59
COL9A3-207ENST00000467819 A0A0C4DFX4 3053 aa24.95■■□□□ 1.59
COL9A3-207ENST00000467819 ZNF536O15090 1300 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 LCTP09848 1927 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 MOXD2PA6NHM9 499 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 RANBP6O60518 1105 aaKnown RBP24.95■■□□□ 1.58
COL9A3-207ENST00000467819 C6orf222P0C671 652 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-207ENST00000467819 PDE1AP54750 535 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 SNAP25P60880 206 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 CCDC144BQ3MJ40 725 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 FAM109BQ6ICB4 259 aaPredicted RBP24.95■■□□□ 1.58
COL9A3-207ENST00000467819 CCDC144CPQ8IYA2 1237 aa24.95■■□□□ 1.58
COL9A3-207ENST00000467819 RAG1P15918 1043 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 ZNF697Q5TEC3 545 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 CCDC174Q6PII3 467 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 GUCD1Q96NT3 240 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 TMEM39AQ9NV64 488 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 ANAPC4Q9UJX5 808 aa24.94■■□□□ 1.58
COL9A3-207ENST00000467819 DLL1O00548 723 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 KIAA0355O15063 1070 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 ALAS1P13196 640 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 CCSAPQ6IQ19 270 aaPredicted RBP24.93■■□□□ 1.58
COL9A3-207ENST00000467819 RCSD1Q6JBY9 416 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 FAM227BQ96M60 508 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 TRERF1Q96PN7 1200 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 SPC25Q9HBM1 224 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 A1CFQ9NQ94 594 aaKnown RBP24.93■■□□□ 1.58
COL9A3-207ENST00000467819 HELLSQ9NRZ9 838 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 TOMM22Q9NS69 142 aa24.93■■□□□ 1.58
COL9A3-207ENST00000467819 CUL9Q8IWT3 2517 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 A0A0D9SFI3 127 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 DCDC2CA8MYV0 355 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 CST5P28325 142 aaPredicted RBP24.92■■□□□ 1.58
COL9A3-207ENST00000467819 FAAP100Q0VG06 881 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 HDAC1Q13547 482 aaPredicted RBP24.92■■□□□ 1.58
COL9A3-207ENST00000467819 CCDC96Q2M329 555 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 FAM133AQ8N9E0 248 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 GLT1D1Q96MS3 346 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 PRR12Q9ULL5 1215 aa24.92■■□□□ 1.58
COL9A3-207ENST00000467819 ORC4O43929 436 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 PLA2G6O60733 806 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 ASGR1P07306 291 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 EPHB4P54760 987 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 TKFCQ3LXA3 575 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 RRP12Q5JTH9 1297 aaKnown RBP24.91■■□□□ 1.58
COL9A3-207ENST00000467819 ANKRD33Q7Z3H0 272 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 PCSK9Q8NBP7 692 aaKnown RBP24.91■■□□□ 1.58
COL9A3-207ENST00000467819 VTI1AQ96AJ9 217 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 KATNBL1Q9H079 304 aa24.91■■□□□ 1.58
COL9A3-207ENST00000467819 UPF3AQ9H1J1 476 aaKnown RBP24.91■■□□□ 1.58
COL9A3-207ENST00000467819 UNC80Q8N2C7 3258 aa24.9■■□□□ 1.58
COL9A3-207ENST00000467819 SOWAHBA6NEL2 793 aa24.9■■□□□ 1.58
COL9A3-207ENST00000467819 GJA9P57773 515 aa24.9■■□□□ 1.58
COL9A3-207ENST00000467819 ALX1Q15699 326 aa24.9■■□□□ 1.58
COL9A3-207ENST00000467819 TOX2Q96NM4 488 aa24.9■■□□□ 1.58
COL9A3-207ENST00000467819 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.89■■□□□ 1.58
COL9A3-207ENST00000467819 FPGSQ05932 587 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 MCMDC2Q4G0Z9 681 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 MUM1L1Q5H9M0 696 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 GNASQ5JWF2 1037 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 NOL8Q76FK4 1167 aaKnown RBP24.89■■□□□ 1.58
COL9A3-207ENST00000467819 RNPC3Q96LT9 517 aaKnown RBP24.89■■□□□ 1.58
COL9A3-207ENST00000467819 LNPKQ9C0E8 428 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 CCPG1Q9ULG6 757 aa24.89■■□□□ 1.58
COL9A3-207ENST00000467819 DDX49Q9Y6V7 483 aaKnown RBP24.89■■□□□ 1.58
COL9A3-207ENST00000467819 CDH23Q9H251 3354 aa24.89■■□□□ 1.57
COL9A3-207ENST00000467819 ELP1O95163 1332 aa24.88■■□□□ 1.57
COL9A3-207ENST00000467819 ASB14A6NK59 587 aa24.88■■□□□ 1.57
COL9A3-207ENST00000467819 FGAP02671 866 aa24.88■■□□□ 1.57
COL9A3-207ENST00000467819 SMAD3P84022 425 aaKnown RBP24.88■■□□□ 1.57
COL9A3-207ENST00000467819 NMIQ13287 307 aaPredicted RBP24.88■■□□□ 1.57
COL9A3-207ENST00000467819 DCAF4Q8WV16 495 aa24.88■■□□□ 1.57
COL9A3-207ENST00000467819 MROH7Q68CQ1 1323 aa24.87■■□□□ 1.57
COL9A3-207ENST00000467819 TRIM6-TRIM34B2RNG4 842 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms