RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 SYNGAP1Q96PV0 1343 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 MYADML2A6NDP7 307 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 AKR1A1P14550 325 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 SDSP20132 328 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 AAMPQ13685 434 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 RRP12Q5JTH9 1297 aaKnown RBP17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 CCDC174Q6PII3 467 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 TBC1D10CQ8IV04 446 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 MSL3Q8N5Y2 521 aaKnown RBP17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 CHST13Q8NET6 341 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 OSBPL3Q9H4L5 887 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 ZHX1Q9UKY1 873 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 PRR12Q9ULL5 1215 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 CNPY2Q9Y2B0 182 aa17.48■□□□□ 0.39
ATPAF2-204ENST00000467560 ASTN1O14525 1302 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 IKQ13123 557 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 A1CFQ9NQ94 594 aaKnown RBP17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 RNF146Q9NTX7 359 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
ATPAF2-204ENST00000467560 TRIM43BA6NCK2 446 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 SOWAHBA6NEL2 793 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 PLA2G6O60733 806 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 SLC16A2P36021 539 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 TLE2Q04725 743 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 MUM1L1Q5H9M0 696 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 Q7L0L9 218 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 CCDC144CPQ8IYA2 1237 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 ACAD9Q9H845 621 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 PDLIM7Q9NR12 457 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 FBXO40Q9UH90 709 aa17.46■□□□□ 0.39
ATPAF2-204ENST00000467560 ZMYM6O95789 1325 aa17.46■□□□□ 0.38
ATPAF2-204ENST00000467560 LTBP2Q14767 1821 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 A0A1W2PQ45 241 aaPredicted RBP17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 A0A1W2PQY0 241 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 ALAS1P13196 640 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 PTGS1P23219 599 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 ITGB8P26012 769 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 C1orf53Q5VUE5 145 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 ARMCX2Q7L311 632 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 RNF180Q86T96 592 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 KLHDC9Q8NEP7 349 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 PURBQ96QR8 312 aaKnown RBP17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 PRDM5Q9NQX1 630 aaPredicted RBP17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 FAM184BQ9ULE4 1060 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 NEDD4P46934 1319 aa17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 FRMPD2Q68DX3 1309 aaPredicted RBP17.45■□□□□ 0.38
ATPAF2-204ENST00000467560 MCM3APO60318 1980 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 FDX1P10109 184 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 ACLYP53396 1101 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 CWC27Q6UX04 472 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 BADQ92934 168 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 IL25Q9H293 177 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
ATPAF2-204ENST00000467560 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 CTAGE5O15320 804 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 PDE4AP27815 886 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 KCNA10Q16322 511 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 AKNAD1Q5T1N1 836 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 BTNL9Q6UXG8 535 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 LBHD1Q9BQE6 289 aaPredicted RBP17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 ABHD16BQ9H3Z7 469 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
ATPAF2-204ENST00000467560 DUSP11O75319 330 aaKnown RBP17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 C9orf50Q5SZB4 431 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 MFSD6Q6ZSS7 791 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 CYP39A1Q9NYL5 469 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 CCPG1Q9ULG6 757 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 A0A0C4DFX4 3053 aa17.42■□□□□ 0.38
ATPAF2-204ENST00000467560 PQBP1O60828 265 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 ICAM1P05362 532 aa17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 PDHBP11177 359 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms