RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SGSM2O43147 1006 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 PTH1RQ03431 593 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 ARRDC4Q8NCT1 418 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 TRERF1Q96PN7 1200 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 ZSCAN10Q96SZ4 725 aaPredicted RBP21.33■■□□□ 1.01
CGREF1-208ENST00000467539 GPCPD1Q9NPB8 672 aa21.33■■□□□ 1.01
CGREF1-208ENST00000467539 SLC16A2P36021 539 aa21.32■■□□□ 1
CGREF1-208ENST00000467539 SNAP25P60880 206 aa21.32■■□□□ 1
CGREF1-208ENST00000467539 ZNF543Q08ER8 600 aa21.32■■□□□ 1
CGREF1-208ENST00000467539 SYDE2Q5VT97 1194 aa21.32■■□□□ 1
CGREF1-208ENST00000467539 RANBP17Q9H2T7 1088 aaKnown RBP21.32■■□□□ 1
CGREF1-208ENST00000467539 ACAD9Q9H845 621 aa21.32■■□□□ 1
CGREF1-208ENST00000467539 CEP290O15078 2479 aa21.31■■□□□ 1
CGREF1-208ENST00000467539 ICAM1P05362 532 aa21.31■■□□□ 1
CGREF1-208ENST00000467539 CCDC174Q6PII3 467 aa21.31■■□□□ 1
CGREF1-208ENST00000467539 HOMER2Q9NSB8 354 aa21.31■■□□□ 1
CGREF1-208ENST00000467539 RNF146Q9NTX7 359 aa21.31■■□□□ 1
CGREF1-208ENST00000467539 U3KPZ7 1027 aaPredicted RBP21.31■■□□□ 1
CGREF1-208ENST00000467539 PFASO15067 1338 aa21.3■■□□□ 1
CGREF1-208ENST00000467539 FRMPD2Q68DX3 1309 aaPredicted RBP21.3■■□□□ 1
CGREF1-208ENST00000467539 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
CGREF1-208ENST00000467539 SNAI1O95863 264 aaPredicted RBP21.3■■□□□ 1
CGREF1-208ENST00000467539 ZNF865P0CJ78 1059 aaPredicted RBP21.3■■□□□ 1
CGREF1-208ENST00000467539 ALAS1P13196 640 aa21.3■■□□□ 1
CGREF1-208ENST00000467539 TAL1P17542 331 aaPredicted RBP21.3■■□□□ 1
CGREF1-208ENST00000467539 GPATCH4Q5T3I0 446 aaKnown RBP21.3■■□□□ 1
CGREF1-208ENST00000467539 MAP4K1Q92918 833 aa21.3■■□□□ 1
CGREF1-208ENST00000467539 CNPY2Q9Y2B0 182 aa21.3■■□□□ 1
CGREF1-208ENST00000467539 DNM1LO00429 736 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 CYP21A2P08686 494 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 ENAHQ8N8S7 591 aaPredicted RBP21.29■■□□□ 1
CGREF1-208ENST00000467539 FAM133AQ8N9E0 248 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 PNMA1Q8ND90 353 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 KAT14Q9H8E8 782 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 A1CFQ9NQ94 594 aaKnown RBP21.29■■□□□ 1
CGREF1-208ENST00000467539 PNMA2Q9UL42 364 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 CCPG1Q9ULG6 757 aa21.29■■□□□ 1
CGREF1-208ENST00000467539 COLQQ9Y215 455 aaPredicted RBP21.29■■□□□ 1
CGREF1-208ENST00000467539 POTEB2H3BUK9 544 aa21.28■■□□□ 1
CGREF1-208ENST00000467539 CNTN2Q02246 1040 aa21.28■■□□□ 1
CGREF1-208ENST00000467539 TRDNQ13061 729 aa21.28■■□□□ 1
CGREF1-208ENST00000467539 HABP4Q5JVS0 413 aaKnown RBP21.28■■□□□ 1
CGREF1-208ENST00000467539 ANO1Q5XXA6 986 aa21.28■■□□□ 1
CGREF1-208ENST00000467539 FGD4Q96M96 766 aa21.28■■□□□ 1
CGREF1-208ENST00000467539 SENP6Q9GZR1 1112 aaPredicted RBP21.28■■□□□ 1
CGREF1-208ENST00000467539 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
CGREF1-208ENST00000467539 GJC2Q5T442 439 aaPredicted RBP21.27■■□□□ 1
CGREF1-208ENST00000467539 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
CGREF1-208ENST00000467539 FAM184BQ9ULE4 1060 aa21.27■■□□□ 1
CGREF1-208ENST00000467539 TNKSO95271 1327 aa21.27■□□□□ 0.99
CGREF1-208ENST00000467539 SOWAHBA6NEL2 793 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 RARBP10826 455 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 AKR1A1P14550 325 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 ACVR2BQ13705 512 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 LRRC41Q15345 812 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 CYB5R4Q7L1T6 521 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 ABHD16BQ9H3Z7 469 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.26■□□□□ 0.99
CGREF1-208ENST00000467539 CYP39A1Q9NYL5 469 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 SMCHD1A6NHR9 2005 aa21.26■□□□□ 0.99
CGREF1-208ENST00000467539 KBTBD13C9JR72 458 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 E7EWF7 191 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 GOLGA8HP0CJ92 632 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 SEC23AQ15436 765 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 LRRC26Q2I0M4 334 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 BMP2KLQ5H9B9 411 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 KIAA1211Q6ZU35 1233 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 UBA5Q9GZZ9 404 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 XPNPEP3Q9NQH7 507 aa21.25■□□□□ 0.99
CGREF1-208ENST00000467539 PLXNA1Q9UIW2 1896 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 ASB14A6NK59 587 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 ASPRV1Q53RT3 343 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
CGREF1-208ENST00000467539 ARMCX2Q7L311 632 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 CCDC144CPQ8IYA2 1237 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 C7orf61Q8IZ16 206 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
CGREF1-208ENST00000467539 CHRDL2Q6WN34 429 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 NSMFQ6X4W1 530 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 RNF180Q86T96 592 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 NCOA7Q8NI08 942 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 CLEC4DQ8WXI8 215 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 ESYT1Q9BSJ8 1104 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 PRO3102Q9H379 93 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 RBM8AQ9Y5S9 174 aaKnown RBP21.23■□□□□ 0.99
CGREF1-208ENST00000467539 WDR19Q8NEZ3 1342 aa21.23■□□□□ 0.99
CGREF1-208ENST00000467539 DUSP11O75319 330 aaKnown RBP21.22■□□□□ 0.99
CGREF1-208ENST00000467539 PARP1P09874 1014 aaKnown RBP21.22■□□□□ 0.99
CGREF1-208ENST00000467539 BAATQ14032 418 aaPredicted RBP21.22■□□□□ 0.99
CGREF1-208ENST00000467539 SLC39A5Q6ZMH5 540 aa21.22■□□□□ 0.99
CGREF1-208ENST00000467539 ADGRF4Q8IZF3 695 aa21.22■□□□□ 0.99
CGREF1-208ENST00000467539 KATNBL1Q9H079 304 aa21.22■□□□□ 0.99
CGREF1-208ENST00000467539 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
CGREF1-208ENST00000467539 ZHX1Q9UKY1 873 aaPredicted RBP21.22■□□□□ 0.99
CGREF1-208ENST00000467539 TAF6LQ9Y6J9 622 aa21.22■□□□□ 0.99
CGREF1-208ENST00000467539 IFIT3O14879 490 aaKnown RBP21.21■□□□□ 0.99
CGREF1-208ENST00000467539 PGK1P00558 417 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
CGREF1-208ENST00000467539 ADCYAP1R1P41586 468 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms